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7,009 Data sources

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  • Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).

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  • MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.

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  • The European Searchable Tumour Line Database (ESTDAB) Database and Cell Bank provide a service enabling investigators to search online for HLA typed, immunologically characterised tumour cells.

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  • The WHOI Ship DataGrabber system provides the oceanographic community on-line access to underway ship data collected on the R/V Atlantis, Knorr, Oceanus, and Tioga (TBD). All the shipboard data is co-registered with the ship's GPS time and navigation systems. The system is built upon the methodology and technology developed for the Alvin Frame-Grabber and the JasonII Virtual Control Van system. A beta-version was deployed on the R/V Atlantis AT11-16 cruise in the summer of 2004 and the system has subsequently been installed on the R/V Knorr and Oceanus.

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  • Explore Bristol Research provides access to the research activities of the institution. The site includes research profiles, publications, and activities. The OAI-PMH feed is limited to include only publications and theses that have associated full text files. The interface is available in English.

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7,009 Data sources
  • more_vert
  • more_vert
  • Ocean Gene Atlas(OGA) is a webservice to explore the biogeography of marine genes based on sequence similarity with environmental genomics datasets. OGA is currently implemented with the Tara Ocean Microbiome-Reference Gene Catalog database and the Marine Atlas of Tara Ocean Unigenes. Gene abundance estimates are computed for DNA metagenomes from the smallest Tara Oceans size fractions (from 0 to 3 µm, OM-RGC), and for RNA metatranscriptomes from Tara Oceans larger size fractions (0.8 to 2000µm, MATOU). OGA also includes curated Tara Oceans Eukaryotic Metagenome and Single-Cell Assembled Genomes (MAGs and SAGs), metagenomics-based transcriptomes (MGTs) and metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean (Arctic MAG+G).

    more_vert
  • MatrixDB stores experimental data established by full-length proteins, matricryptins, glycosaminoglycans, lipids and cations. MatrixDB reports interactions with individual polypeptide chains or with multimers (e.g. collagens, laminins, thrombospondins) when appropriate. Multimers are treated as permanent complexes, referencing EBI identifiers when possible. Human interactions were inferred from non-human homologous interactions when available.

    more_vert
  • more_vert
  • The European Searchable Tumour Line Database (ESTDAB) Database and Cell Bank provide a service enabling investigators to search online for HLA typed, immunologically characterised tumour cells.

    more_vert
  • The WHOI Ship DataGrabber system provides the oceanographic community on-line access to underway ship data collected on the R/V Atlantis, Knorr, Oceanus, and Tioga (TBD). All the shipboard data is co-registered with the ship's GPS time and navigation systems. The system is built upon the methodology and technology developed for the Alvin Frame-Grabber and the JasonII Virtual Control Van system. A beta-version was deployed on the R/V Atlantis AT11-16 cruise in the summer of 2004 and the system has subsequently been installed on the R/V Knorr and Oceanus.

    more_vert
  • more_vert
  • Explore Bristol Research provides access to the research activities of the institution. The site includes research profiles, publications, and activities. The OAI-PMH feed is limited to include only publications and theses that have associated full text files. The interface is available in English.

    more_vert
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