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- Thematic: No
- Data Repository United States Compatibility:Not yet registeredPartners:Harvard University, ISB, HHMI, UM Genomics, DNA sequence, AnnotationHarvard University,ISB,HHMI,UM
The Dfam database is a open collection of DNA Transposable Element sequence alignments, hidden Markov Models (HMMs), consensus sequences, and genome annotations. Dfam represents a collection of multiple sequence alignments, each containing a set of representative members of a specific transposable element family. These alignments (seed alignments) are used to generate HMMs and consensus sequences for each family. The Dfam website gives information about each family, and provides genome annotations for a collection of core genomes.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.6ktmmc&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.6ktmmc&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States, United Kingdom Compatibility:Not yet registeredPartners:Jackson Laboratory, EBI Translational Medicine, Preclinical Studies, GeneticsJackson Laboratory,EBI
re3data: r3d100012961
PDX Finder is an open repository for the upload and storage of clinical, genomic and functional Patient-Derived Xenograph (PDX) data which provides a comprehensive global catalogue of PDX models available for researchers across distributed repository databases. Integrated views are provided for histopathological image data, molecular classification of tumors, host mouse strain metadata, tumor genomic data and metrics on tumor response to chemotherapeutics. The data model for PDX Finder is based on the minimal information standard for PDX models developed in collaboration with a broad range of stakeholders who create and/or use PDX models in basic and pre-clinical cancer research.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.j3y6a0&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.j3y6a0&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:JHU Life Science, Biomedical Science, Health ScienceJHU
re3data: r3d100012849
The CardioVascular Research Grid (CVRG) project is creating an infrastructure for sharing cardiovascular data and data analysis tools. CVRG tools are developed using the Software as a Service model, allowing users to access tools through their browser, thus eliminating the need to install and maintain complex software.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.x80z26&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.x80z26&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository France Compatibility:OpenAIRE PubRepos v4.0Partners:Institut Pasteur Biology and Biochemistry, Chemistry and Chemical TechnologyInstitut PasteurOAI-PMH URL: https://api.archives-ouvertes.fr/oai/pasteur
This site provides access to the output of the institution. Users may set up an RSS feed to be alerted to new content. Some items are not available as full-text. The interface is available in French and English. Additional services such as exporting of publications lists are available. Some items are linked to their PubMed records
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::2cad8fa47bbef282badbb8de5374b894&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::2cad8fa47bbef282badbb8de5374b894&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Center for Computational Mass Spectrometry, University of California San Diego, United States Functional Genomics, Lipidomics, MetabolomicsCenter for Computational Mass Spectrometry, University of California San Diego, United States
re3data: r3d100012858
MassIVE is a worldwide mass spectrometry data repository integrated into a flexible, scalable, user-friendly framework offering a diverse set of data analysis algorithms and tools. MassIVE is a mass spectrometry community resource data repository, developed the Center for Computational Mass Spectrometry (CCMS), designed to store, browse, redistribute, re-analyze and integrate all publicly available mass spectrometry data in promoting globally accessible and free exchange of mass spectrometry data. The MassIVE data repository provides reliable sharing of primary data in addition to offering user-friendly tools for advanced data analysis and visualization.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.lysimd&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.lysimd&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:KCL Humanities and Social Sciences, Psychology, EconomicsKCL
re3data: r3d100013359
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100013359&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100013359&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository United States Compatibility:Not yet registeredPartners:XULAXULAAll Research products
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arrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::e474e8520850a6f3d13f268666736f33&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::e474e8520850a6f3d13f268666736f33&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Rice University, Rice University, Kinder Institute for Urban Research, Rice, Kinder Institute for Urban Research, Houston Endowment Humanities and Social Sciences, Education Sciences, Research on Teaching, Learning and TrainingRice University,Rice University, Kinder Institute for Urban Research,Rice, Kinder Institute for Urban Research,Houston Endowment
re3data: r3d100012884
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100012884&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100012884&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:UNAVCO, ASU, SDSC Environmental Science, Earth Science, BathymetryUNAVCO,ASU,SDSC
re3data: r3d100010655
The National Science Foundation funded OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.88wme4&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.88wme4&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu
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- Data Repository United States Compatibility:Not yet registeredPartners:Harvard University, ISB, HHMI, UM Genomics, DNA sequence, AnnotationHarvard University,ISB,HHMI,UM
The Dfam database is a open collection of DNA Transposable Element sequence alignments, hidden Markov Models (HMMs), consensus sequences, and genome annotations. Dfam represents a collection of multiple sequence alignments, each containing a set of representative members of a specific transposable element family. These alignments (seed alignments) are used to generate HMMs and consensus sequences for each family. The Dfam website gives information about each family, and provides genome annotations for a collection of core genomes.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.6ktmmc&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.6ktmmc&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States, United Kingdom Compatibility:Not yet registeredPartners:Jackson Laboratory, EBI Translational Medicine, Preclinical Studies, GeneticsJackson Laboratory,EBI
re3data: r3d100012961
PDX Finder is an open repository for the upload and storage of clinical, genomic and functional Patient-Derived Xenograph (PDX) data which provides a comprehensive global catalogue of PDX models available for researchers across distributed repository databases. Integrated views are provided for histopathological image data, molecular classification of tumors, host mouse strain metadata, tumor genomic data and metrics on tumor response to chemotherapeutics. The data model for PDX Finder is based on the minimal information standard for PDX models developed in collaboration with a broad range of stakeholders who create and/or use PDX models in basic and pre-clinical cancer research.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.j3y6a0&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.j3y6a0&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:JHU Life Science, Biomedical Science, Health ScienceJHU
re3data: r3d100012849
The CardioVascular Research Grid (CVRG) project is creating an infrastructure for sharing cardiovascular data and data analysis tools. CVRG tools are developed using the Software as a Service model, allowing users to access tools through their browser, thus eliminating the need to install and maintain complex software.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.x80z26&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.x80z26&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository France Compatibility:OpenAIRE PubRepos v4.0Partners:Institut Pasteur Biology and Biochemistry, Chemistry and Chemical TechnologyInstitut PasteurOAI-PMH URL: https://api.archives-ouvertes.fr/oai/pasteur
This site provides access to the output of the institution. Users may set up an RSS feed to be alerted to new content. Some items are not available as full-text. The interface is available in French and English. Additional services such as exporting of publications lists are available. Some items are linked to their PubMed records
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::2cad8fa47bbef282badbb8de5374b894&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::2cad8fa47bbef282badbb8de5374b894&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Center for Computational Mass Spectrometry, University of California San Diego, United States Functional Genomics, Lipidomics, MetabolomicsCenter for Computational Mass Spectrometry, University of California San Diego, United States
re3data: r3d100012858
MassIVE is a worldwide mass spectrometry data repository integrated into a flexible, scalable, user-friendly framework offering a diverse set of data analysis algorithms and tools. MassIVE is a mass spectrometry community resource data repository, developed the Center for Computational Mass Spectrometry (CCMS), designed to store, browse, redistribute, re-analyze and integrate all publicly available mass spectrometry data in promoting globally accessible and free exchange of mass spectrometry data. The MassIVE data repository provides reliable sharing of primary data in addition to offering user-friendly tools for advanced data analysis and visualization.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.lysimd&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.lysimd&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United Kingdom Compatibility:Not yet registeredPartners:KCL Humanities and Social Sciences, Psychology, EconomicsKCL
re3data: r3d100013359
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100013359&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100013359&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository United States Compatibility:Not yet registeredPartners:XULAXULAAll Research products
arrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::8c97dbeee3b0d40ced7f514b99a93d93&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::8c97dbeee3b0d40ced7f514b99a93d93&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Institutional Repository United Kingdom Compatibility:Not yet registeredPartners:RAURAUAll Research products
arrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::e474e8520850a6f3d13f268666736f33&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=opendoar____::e474e8520850a6f3d13f268666736f33&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:Rice University, Rice University, Kinder Institute for Urban Research, Rice, Kinder Institute for Urban Research, Houston Endowment Humanities and Social Sciences, Education Sciences, Research on Teaching, Learning and TrainingRice University,Rice University, Kinder Institute for Urban Research,Rice, Kinder Institute for Urban Research,Houston Endowment
re3data: r3d100012884
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100012884&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=r3d100012884&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu - Data Repository United States Compatibility:Not yet registeredPartners:UNAVCO, ASU, SDSC Environmental Science, Earth Science, BathymetryUNAVCO,ASU,SDSC
re3data: r3d100010655
The National Science Foundation funded OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.88wme4&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eumore_vert All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.25504/fairsharing.88wme4&type=result"></script>'); --> </script>For further information contact us at helpdesk@openaire.eu
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