• European Marine Science
• Research softwareclose
• Other research productsclose
• ZENODO close

The gCube System - Accounting Aggregator -------------------------------------------------- Accounting Aggregator Smart Executor Plugin This software is part of the gCube Framework (https://www.gcube-system.org/): an open-source software toolkit used for building and operating Hybrid Data Infrastructures enabling the dynamic deployment of Virtual Research Environments by favouring the realisation of reuse oriented policies. The projects leading to this software have received funding from a series of European Union programmes including: * the Sixth Framework Programme for Research and Technological Development - DILIGENT (grant no. 004260); * the Seventh Framework Programme for research, technological development and demonstration - D4Science (grant no. 212488), D4Science-II (grant no. 239019),ENVRI (grant no. 283465), EUBrazilOpenBio (grant no. 288754), iMarine (grant no. 283644); * the H2020 research and innovation programme - BlueBRIDGE (grant no. 675680), EGIEngage (grant no. 654142), ENVRIplus (grant no. 654182), Parthenos (grant no. 654119), SoBigData (grant no. 654024); Version -------------------------------------------------- 1.2.0-4.8.0-154717 (2017-12-01) Please see the file named "changelog.xml" in this directory for the release notes. Authors -------------------------------------------------- * Alessandro Pieve (alessandro.pieve-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). * Luca Frosini (luca.frosini-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). Maintainers ----------- * Luca Frosini (luca.frosini-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). Download information -------------------------------------------------- Source code is available from SVN: https://svn.research-infrastructures.eu/public/d4science/gcube/trunk/accounting/accounting-aggregator-se-plugin Binaries can be downloaded from the gCube website: https://www.gcube-system.org/ Installation -------------------------------------------------- Installation documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php/SmartExecutor Documentation -------------------------------------------------- Documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php/SmartExecutor Support -------------------------------------------------- Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Licensing -------------------------------------------------- This software is licensed under the terms you may find in the file named "LICENSE" in this directory.

The gCube System - resourceregistry-configuration-index -------------------------------------------------- ResourceRegistry Configuration Index This software is part of the gCube Framework (https://www.gcube-system.org/): an open-source software toolkit used for building and operating Hybrid Data Infrastructures enabling the dynamic deployment of Virtual Research Environments by favouring the realisation of reuse oriented policies. The projects leading to this software have received funding from a series of European Union programmes including: * the Sixth Framework Programme for Research and Technological Development - DILIGENT (grant no. 004260); * the Seventh Framework Programme for research, technological development and demonstration - D4Science (grant no. 212488), D4Science-II (grant no. 239019),ENVRI (grant no. 283465), EUBrazilOpenBio (grant no. 288754), iMarine (grant no. 283644); * the H2020 research and innovation programme - BlueBRIDGE (grant no. 675680), EGIEngage (grant no. 654142), ENVRIplus (grant no. 654182), Parthenos (grant no. 654119), SoBigData (grant no. 654024); Version -------------------------------------------------- 1.0.3-4.2.0-126435 (2016-12-16) Please see the file named "changelog.xml" in this directory for the release notes. Authors -------------------------------------------------- * Gerasimos Farantatos (g.farantatos-AT-di.uoa.gr), University of Athens, Department of Informatics and Telecommunications. * Alexandros Antoniadis (a.antoniadis-AT-di.uoa.gr), University of Athens, Department of Informatics and Telecommunications. Maintainers ----------- Download information -------------------------------------------------- Source code is available from SVN: http://svn.research-infrastructures.eu/public/d4science/gcube/branches/resource-registry/ResourceRegistry-configuration-index/1.0/ResourceRegistry-configuration-index Binaries can be downloaded from the gCube website: https://www.gcube-system.org/ Installation -------------------------------------------------- Installation documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php Documentation -------------------------------------------------- Documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php Support -------------------------------------------------- Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Licensing -------------------------------------------------- This software is licensed under the terms you may find in the file named "LICENSE" in this directory.

Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.

The gCube System - tabular-data-unionwizard-widget -------------------------------------------------- tabular-data-unionwizard-widget allows the union of tabular resources This software is part of the gCube Framework (https://www.gcube-system.org/): an open-source software toolkit used for building and operating Hybrid Data Infrastructures enabling the dynamic deployment of Virtual Research Environments by favouring the realisation of reuse oriented policies. The projects leading to this software have received funding from a series of European Union programmes including: * the Sixth Framework Programme for Research and Technological Development - DILIGENT (grant no. 004260); * the Seventh Framework Programme for research, technological development and demonstration - D4Science (grant no. 212488), D4Science-II (grant no. 239019),ENVRI (grant no. 283465), EUBrazilOpenBio (grant no. 288754), iMarine (grant no. 283644); * the H2020 research and innovation programme - BlueBRIDGE (grant no. 675680), EGIEngage (grant no. 654142), ENVRIplus (grant no. 654182), Parthenos (grant no. 654119), SoBigData (grant no. 654024); Version -------------------------------------------------- 1.5.0-4.6.0-125889 (2017-08-01) Please see the file named "changelog.xml" in this directory for the release notes. Authors -------------------------------------------------- * Giancarlo Panichi (giancarlo.panichi-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" CNR, Pisa IT Maintainers ----------- * Giancarlo Panichi (giancarlo.panichi-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" CNR, Pisa IT Download information -------------------------------------------------- Source code is available from SVN: https://svn.research-infrastructures.eu/public/d4science/gcube/trunk/portlets/user/tabular-data-unionwizard-widget Binaries can be downloaded from the gCube website: https://www.gcube-system.org/ Installation -------------------------------------------------- Installation documentation is available on-line in the gCube Wiki: https://gcube.wiki.gcube-system.org/gcube/index.php/Tabular_Data_Manager Documentation -------------------------------------------------- Documentation is available on-line in the gCube Wiki: https://gcube.wiki.gcube-system.org/gcube/index.php/Tabular_Data_Manager Support -------------------------------------------------- Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Licensing -------------------------------------------------- This software is licensed under the terms you may find in the file named "LICENSE" in this directory.

Widget that allows visualization of tabular data coming from different kind of sources Documentation Documentation is available on-line in the gCube Wiki: https://gcube.wiki.gcube-system.org/gcube/index.php/Tabular_Data_Manager Installation Installation documentation is available on-line in the gCube Wiki: https://gcube.wiki.gcube-system.org/gcube/index.php/Tabular_Data_Manager Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: Updated to GWT 2.6.1Updated to GXT 3.1.1 Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

gCube Ckan metadata publisher widget is a GWT Widget that allows to publish metadata on the d4science ckan data catalogue. Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: External Url files are properly managed as resources Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

The gCube System - IS Sweeper Smart Executor Plugin -------------------------------------------------- Smart Executor Plugin to run Sweeper. Normally is launched as Scheduled Task This software is part of the gCube Framework (https://www.gcube-system.org/): an open-source software toolkit used for building and operating Hybrid Data Infrastructures enabling the dynamic deployment of Virtual Research Environments by favouring the realisation of reuse oriented policies. The projects leading to this software have received funding from a series of European Union programmes including: * the Sixth Framework Programme for Research and Technological Development - DILIGENT (grant no. 004260); * the Seventh Framework Programme for research, technological development and demonstration - D4Science (grant no. 212488), D4Science-II (grant no. 239019),ENVRI (grant no. 283465), EUBrazilOpenBio (grant no. 288754), iMarine (grant no. 283644); * the H2020 research and innovation programme - BlueBRIDGE (grant no. 675680), EGIEngage (grant no. 654142), ENVRIplus (grant no. 654182), Parthenos (grant no. 654119), SoBigData (grant no. 654024); Version -------------------------------------------------- 1.1.0-4.8.0-144297 (2017-12-01) Please see the file named "changelog.xml" in this directory for the release notes. Authors -------------------------------------------------- * Luca Frosini (luca.frosini-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). Maintainers ----------- * Luca Frosini (luca.frosini-AT-isti.cnr.it), Istituto di Scienza e Tecnologie dell'Informazione "A. Faedo" - CNR, Pisa (Italy). Download information -------------------------------------------------- Source code is available from SVN: https://svn.research-infrastructures.eu/public/d4science/gcube/trunk/information-system/is-sweeper-se-plugin Binaries can be downloaded from the gCube website: https://www.gcube-system.org/ Installation -------------------------------------------------- Installation documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php/SmartExecutor Documentation -------------------------------------------------- Documentation is available on-line in the gCube Wiki: https://wiki.gcube-system.org/gcube/index.php/SmartExecutor Support -------------------------------------------------- Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Licensing -------------------------------------------------- This software is licensed under the terms you may find in the file named "LICENSE" in this directory.

gCube VRE Deploy Wizard Portlet. Support Bugs and support requests can be reported in the gCube issue tracking tool: https://support.d4science.org/projects/gcube/ Changes in this version: Feature #5729, send email to infraManagers upon new VRE cretionsTask #10052, send email to infraManagers upon new VRE cretionsFeature #6315, remove the mandatory node in creation phase Older versions of this component are also published in Zenodo, but with a different naming. They can be found here. ──────────This software is part of the gCube Framework: an open-source software toolkit used for building and operating Hybrid Data Infrastructures. Find out more at https://www.gcube-system.org/.

To overcome the cost of competition resulting from foraging socially, individuals may balance their use of private (i.e. acquired from personal sampling) and social (i.e. acquired by watching other individuals) information to adjust their foraging strategy accordingly. Reliability of private information about environmental characteristics, such as the spatial distribution of prey, is thus likely to affect individual movement and social interactions. We aimed to investigate how movement characteristics of foraging individuals changed as they acquired reliable information about the spatial occurrence of prey in a foraging context. We allowed guppies (Poecilia reticulata) to develop the reliability of their private knowledge about prey spatial occurrence by repeatedly testing shoals in a foraging task under three experimental distributions of prey: 1) aggregated prey forming three patches located in fixed locations, 2) scattered distribution of prey with random locations, or 3) no prey (used as control). Using individual time series of spatial coordinates, we computed a suite of movement variables reflecting search effort, social proximity and locomotion characteristics during foraging, to examine changes occurring over repeated trials. Over time, individuals foraging on either scattered or aggregated prey travelled greater distances, showed an increasing distance to their closest neighbour and became more stochastic in their acceleration profile, compared to control individuals. We found that behaviour changed as private information increased over time, with a behavioural shift and an increase of collective foraging efficiency occurring on the third testing day. Social proximity was the major predictor of foraging success in the absence of prior foraging information, while search effort became the most important predictors of foraging success as information increased. In conclusion, we show that individual movement patterns changed as they acquired private information. Contrary to our predictions, the spatial distribution of prey did not affect any of the movement variables of interest. This dataset was collected by filming guppy shoals foraging in an experimental arena under laboratory conditions. A number of variables (viz. distance travelled, distance to nearest neighbour, acceleration entropy, time spent grouping, number and duration of grouping events) were computed from the tracking data of the first minute of the foraging trials. Statistical investigations aimed to identify changes in movement characteristics and social interactions occuring over repeated foraging trials. R and Excel are required to access the data files. Funding provided by: Australian Society for Fish BiologyCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100001158Award Number: Barry Jonassen AwardFunding provided by: Australian Research CouncilCrossref Funder Registry ID: http://dx.doi.org/10.13039/501100000923Award Number: ARC Discovery Project Grant DP190100660

Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.