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- Other research product . 2021Open Access EnglishAuthors:Clyne, Margot; Lamarque, Jean-Francois; Mills, Michael J.; Khodri, Myriam; Ball, William; Bekki, Slimane; Dhomse, Sandip S.; Lebas, Nicolas; Mann, Graham; Marshall, Lauren; +13 moreClyne, Margot; Lamarque, Jean-Francois; Mills, Michael J.; Khodri, Myriam; Ball, William; Bekki, Slimane; Dhomse, Sandip S.; Lebas, Nicolas; Mann, Graham; Marshall, Lauren; Niemeier, Ulrike; Poulain, Virginie; Robock, Alan; Rozanov, Eugene; Schmidt, Anja; Stenke, Andrea; Sukhodolov, Timofei; Timmreck, Claudia; Toohey, Matthew; Tummon, Fiona; Zanchettin, Davide; Zhu, Yunqian; Toon, Owen B.;Project: NSF | Decadal Prediction Follow... (1430051), SNSF | SPARC International Proje... (138017), UKRI | The North Atlantic Climat... (NE/N018001/1), EC | STRATOCLIM (603557), UKRI | Reconciling Volcanic Forc... (NE/S000887/1)
As part of the Model Intercomparison Project on the climatic response to Volcanic forcing (VolMIP), several climate modeling centers performed a coordinated pre-study experiment with interactive stratospheric aerosol models simulating the volcanic aerosol cloud from an eruption resembling the 1815 Mt. Tambora eruption (VolMIP-Tambora ISA ensemble). The pre-study provided the ancillary ability to assess intermodel diversity in the radiative forcing for a large stratospheric-injecting equatorial eruption when the volcanic aerosol cloud is simulated interactively. An initial analysis of the VolMIP-Tambora ISA ensemble showed large disparities between models in the stratospheric global mean aerosol optical depth (AOD). In this study, we now show that stratospheric global mean AOD differences among the participating models are primarily due to differences in aerosol size, which we track here by effective radius. We identify specific physical and chemical processes that are missing in some models and/or parameterized differently between models, which are together causing the differences in effective radius. In particular, our analysis indicates that interactively tracking hydroxyl radical (OH) chemistry following a large volcanic injection of sulfur dioxide (SO2) is an important factor in allowing for the timescale for sulfate formation to be properly simulated. In addition, depending on the timescale of sulfate formation, there can be a large difference in effective radius and subsequently AOD that results from whether the SO2 is injected in a single model grid cell near the location of the volcanic eruption, or whether it is injected as a longitudinally averaged band around the Earth.
- Other research product . 2020Open Access EnglishAuthors:Helmond, Niels A. G. M.; Robertson, Elizabeth K.; Conley, Daniel J.; Hermans, Martijn; Humborg, Christoph; Kubeneck, L. Joëlle; Lenstra, Wytze K.; Slomp, Caroline P.;Helmond, Niels A. G. M.; Robertson, Elizabeth K.; Conley, Daniel J.; Hermans, Martijn; Humborg, Christoph; Kubeneck, L. Joëlle; Lenstra, Wytze K.; Slomp, Caroline P.;Project: NWO | Response of the Iron Biog... (11124), EC | PHOXY (278364)
Coastal systems can act as filters for anthropogenic nutrient input into marine environments. Here, we assess the processes controlling the removal of phosphorus (P) and nitrogen (N) for four sites in the eutrophic Stockholm archipelago. Bottom water concentrations of oxygen (O2) and P are inversely correlated. This is attributed to the seasonal release of P from iron-oxide-bound (Fe-oxide-bound) P in surface sediments and from degrading organic matter. The abundant presence of sulfide in the pore water and its high upward flux towards the sediment surface (∼4 to 8 mmol m−2 d−1), linked to prior deposition of organic-rich sediments in a low-O2 setting (“legacy of hypoxia”), hinder the formation of a larger Fe-oxide-bound P pool in winter. This is most pronounced at sites where water column mixing is naturally relatively low and where low bottom water O2 concentrations prevail in summer. Burial rates of P are high at all sites (0.03–0.3 mol m−2 yr−1), a combined result of high sedimentation rates (0.5 to 3.5 cm yr−1) and high sedimentary P at depth (∼30 to 50 µmol g−1). Sedimentary P is dominated by Fe-bound P and organic P at the sediment surface and by organic P, authigenic Ca-P and detrital P at depth. Apart from one site in the inner archipelago, where a vivianite-type Fe(II)-P mineral is likely present at depth, there is little evidence for sink switching of organic or Fe-oxide-bound P to authigenic P minerals. Denitrification is the major benthic nitrate-reducing process at all sites (0.09 to 1.7 mmol m−2 d−1) with rates decreasing seaward from the inner to outer archipelago. Our results explain how sediments in this eutrophic coastal system can remove P through burial at a relatively high rate, regardless of whether the bottom waters are oxic or (frequently) hypoxic. Our results suggest that benthic N processes undergo annual cycles of removal and recycling in response to hypoxic conditions. Further nutrient load reductions are expected to contribute to the recovery of the eutrophic Stockholm archipelago from hypoxia. Based on the dominant pathways of P and N removal identified in this study, it is expected that the sediments will continue to remove part of the P and N loads.
- Other research product . 2020Open Access EnglishAuthors:Hopwood, Mark J.; Sanchez, Nicolas; Polyviou, Despo; Leiknes, Øystein; Gallego-Urrea, Julián Alberto; Achterberg, Eric P.; Ardelan, Murat V.; Aristegui, Javier; Bach, Lennart; Besiktepe, Sengul; +6 moreHopwood, Mark J.; Sanchez, Nicolas; Polyviou, Despo; Leiknes, Øystein; Gallego-Urrea, Julián Alberto; Achterberg, Eric P.; Ardelan, Murat V.; Aristegui, Javier; Bach, Lennart; Besiktepe, Sengul; Heriot, Yohann; Kalantzi, Ioanna; Terbıyık Kurt, Tuba; Santi, Ioulia; Tsagaraki, Tatiana M.; Turner, David;Project: EC | OCEAN-CERTAIN (603773)
The extracellular concentration of H2O2 in surface aquatic environments is controlled by a balance between photochemical production and the microbial synthesis of catalase and peroxidase enzymes to remove H2O2 from solution. In any kind of incubation experiment, the formation rates and equilibrium concentrations of reactive oxygen species (ROSs) such as H2O2 may be sensitive to both the experiment design, particularly to the regulation of incident light, and the abundance of different microbial groups, as both cellular H2O2 production and catalase–peroxidase enzyme production rates differ between species. Whilst there are extensive measurements of photochemical H2O2 formation rates and the distribution of H2O2 in the marine environment, it is poorly constrained how different microbial groups affect extracellular H2O2 concentrations, how comparable extracellular H2O2 concentrations within large-scale incubation experiments are to those observed in the surface-mixed layer, and to what extent a mismatch with environmentally relevant concentrations of ROS in incubations could influence biological processes differently to what would be observed in nature. Here we show that both experiment design and bacterial abundance consistently exert control on extracellular H2O2 concentrations across a range of incubation experiments in diverse marine environments. During four large-scale (>1000 L) mesocosm experiments (in Gran Canaria, the Mediterranean, Patagonia and Svalbard) most experimental factors appeared to exert only minor, or no, direct effect on H2O2 concentrations. For example, in three of four experiments where pH was manipulated to 0.4–0.5 below ambient pH, no significant change was evident in extracellular H2O2 concentrations relative to controls. An influence was sometimes inferred from zooplankton density, but not consistently between different incubation experiments, and no change in H2O2 was evident in controlled experiments using different densities of the copepod Calanus finmarchicus grazing on the diatom Skeletonema costatum (<1 % change in [H2O2] comparing copepod densities from 1 to 10 L−1). Instead, the changes in H2O2 concentration contrasting high- and low-zooplankton incubations appeared to arise from the resulting changes in bacterial activity. The correlation between bacterial abundance and extracellular H2O2 was stronger in some incubations than others (R2 range 0.09 to 0.55), yet high bacterial densities were consistently associated with low H2O2. Nonetheless, the main control on H2O2 concentrations during incubation experiments relative to those in ambient, unenclosed waters was the regulation of incident light. In an open (lidless) mesocosm experiment in Gran Canaria, H2O2 was persistently elevated (2–6-fold) above ambient concentrations; whereas using closed high-density polyethylene mesocosms in Crete, Svalbard and Patagonia H2O2 within incubations was always reduced (median 10 %–90 %) relative to ambient waters.
- Other research product . Other ORP type . 2020Open Access EnglishAuthors:Hopwood, Mark J.; Santana-González, Carolina; Gallego-Urrea, Julian; Sanchez, Nicolas; Achterberg, Eric P.; Ardelan, Murat V.; Gledhill, Martha; González-Dávila, Melchor; Hoffmann, Linn; Leiknes, Øystein; +3 moreHopwood, Mark J.; Santana-González, Carolina; Gallego-Urrea, Julian; Sanchez, Nicolas; Achterberg, Eric P.; Ardelan, Murat V.; Gledhill, Martha; González-Dávila, Melchor; Hoffmann, Linn; Leiknes, Øystein; Santana-Casiano, Juana Magdalena; Tsagaraki, Tatiana M.; Turner, David;Publisher: Copernicus Publications under license by EGUProject: EC | OCEAN-CERTAIN (603773)
The speciation of dissolved iron (DFe) in the ocean is widely assumed to consist almost exclusively of Fe(III)-ligand complexes. Yet in most aqueous environments a poorly defined fraction of DFe also exists as Fe(II), the speciation of which is uncertain. Here we deploy flow injection analysis to measure in situ Fe(II) concentrations during a series of mesocosm/microcosm/multistressor experiments in coastal environments in addition to the decay rate of this Fe(II) when moved into the dark. During five mesocosm/microcosm/multistressor experiments in Svalbard and Patagonia, where dissolved (0.2 µm) Fe and Fe(II) were quantified simultaneously, Fe(II) constituted 24 %–65 % of DFe, suggesting that Fe(II) was a large fraction of the DFe pool. When this Fe(II) was allowed to decay in the dark, the vast majority of measured oxidation rate constants were less than calculated constants derived from ambient temperature, salinity, pH, and dissolved O2. The oxidation rates of Fe(II) spikes added to Atlantic seawater more closely matched calculated rate constants. The difference between observed and theoretical decay rates in Svalbard and Patagonia was most pronounced at Fe(II) concentrations <2 nM, suggesting that the effect may have arisen from organic Fe(II) ligands. This apparent enhancement of Fe(II) stability under post-bloom conditions and the existence of such a high fraction of DFe as Fe(II) challenge the assumption that DFe speciation in coastal seawater is dominated by ligand bound-Fe(III) species.
- Other research product . Collection . 2020Open Access EnglishAuthors:Sanchez, Nicolas; Leiknes, Øystein; Tsagaraki, Tatiana M; Hopwood, Mark James; Gallego-Urrea, J; Kuttivadakkethil Avarachen, Mathew; Cuevas, L Antonio; Kankus, Janset; King, Andrew L; Reggiani, Emanuele Roberto; +18 moreSanchez, Nicolas; Leiknes, Øystein; Tsagaraki, Tatiana M; Hopwood, Mark James; Gallego-Urrea, J; Kuttivadakkethil Avarachen, Mathew; Cuevas, L Antonio; Kankus, Janset; King, Andrew L; Reggiani, Emanuele Roberto; Bratbak, Gunnar; Larsen, Aud; Sandaa, Ruth-Anne; Egge, Jorun K; Turner, David; Besiktepe, Sengul; Bizsel, Kemal Can; Bizsel, Nihayet; Iriarte, Jose Luis; González, Humberto; Torres, Rodrigo; Bellerby, Richard G J; Thingstad, Tron Frede; Hoffmann, Linn; Achterberg, Eric Pieter; Vadstein, Olav; Olsen, Yngvar; Ardelan, Murat V;Publisher: PANGAEAProject: EC | OCEAN-CERTAIN (603773)
The data-sets comes from three locations representative of three different marine ecosystems: Fjord (Chilean Patagonia), Ny-Ålesund (Arctic) and Mediterranean (Crete). It contains chemical and biological data collected in three mesocosm and four microcosm experiments conducted in the spring - summer period, in which the physico-chemical (pH, Carbon) and biological (grazing) conditions were altered to represent potential future climate change scenarios. The data-sets contains measurements in: carbonate chemistry, macro- and micro-nutrients concentrations, primary production, phytoplankton taxonomy, virus abundance, bacterial production, bacterial abundance, Zoo- and microzoo-plankton abundance, grazing rates for different taxonomic groups.
- Other research product . 2019Open Access EnglishAuthors:Maffezzoli, Niccolò; Vallelonga, Paul; Edwards, Ross; Saiz-Lopez, Alfonso; Turetta, Clara; Kjær, Helle Astrid; Barbante, Carlo; Vinther, Bo; Spolaor, Andrea;Maffezzoli, Niccolò; Vallelonga, Paul; Edwards, Ross; Saiz-Lopez, Alfonso; Turetta, Clara; Kjær, Helle Astrid; Barbante, Carlo; Vinther, Bo; Spolaor, Andrea;Project: EC | ICE2ICE (610055), EC | CLIMAHAL (726349)
Although it has been demonstrated that the speed and magnitude of the recent Arctic sea ice decline is unprecedented for the past 1450 years, few records are available to provide a paleoclimate context for Arctic sea ice extent. Bromine enrichment in ice cores has been suggested to indicate the extent of newly formed sea ice areas. Despite the similarities among sea ice indicators and ice core bromine enrichment records, uncertainties still exist regarding the quantitative linkages between bromine reactive chemistry and the first-year sea ice surfaces. Here we present a 120 000-year record of bromine enrichment from the RECAP (REnland ice CAP) ice core, coastal east Greenland, and interpret it as a record of first-year sea ice. We compare it to existing sea ice records from marine cores and tentatively reconstruct past sea ice conditions in the North Atlantic as far north as the Fram Strait (50–85∘ N). Our interpretation implies that during the last deglaciation, the transition from multi-year to first-year sea ice started at ∼17.5 ka, synchronously with sea ice reductions observed in the eastern Nordic Seas and with the increase in North Atlantic ocean temperature. First-year sea ice reached its maximum at 12.4–11.8 ka during the Younger Dryas, after which open-water conditions started to dominate, consistent with sea ice records from the eastern Nordic Seas and the North Icelandic shelf. Our results show that over the last 120 000 years, multi-year sea ice extent was greatest during Marine Isotope Stage (MIS) 2 and possibly during MIS 4, with more extended first-year sea ice during MIS 3 and MIS 5. Sea ice extent during the Holocene (MIS 1) has been less than at any time in the last 120 000 years.
- Other research product . 2019Open Access EnglishAuthors:Seroussi, Hélène; Nowicki, Sophie; Simon, Erika; Abe-Ouchi, Ayako; Albrecht, Torsten; Brondex, Julien; Cornford, Stephen; Dumas, Christophe; Gillet-Chaulet, Fabien; Goelzer, Heiko; +29 moreSeroussi, Hélène; Nowicki, Sophie; Simon, Erika; Abe-Ouchi, Ayako; Albrecht, Torsten; Brondex, Julien; Cornford, Stephen; Dumas, Christophe; Gillet-Chaulet, Fabien; Goelzer, Heiko; Golledge, Nicholas R.; Gregory, Jonathan M.; Greve, Ralf; Hoffman, Matthew J.; Humbert, Angelika; Huybrechts, Philippe; Kleiner, Thomas; Larour, Eric; Leguy, Gunter; Lipscomb, William H.; Lowry, Daniel; Mengel, Matthias; Morlighem, Mathieu; Pattyn, Frank; Payne, Anthony J.; Pollard, David; Price, Stephen F.; Quiquet, Aurélien; Reerink, Thomas J.; Reese, Ronja; Rodehacke, Christian B.; Schlegel, Nicole-Jeanne; Shepherd, Andrew; Sun, Sainan; Sutter, Johannes; Breedam, Jonas; Wal, Roderik S. W.; Winkelmann, Ricarda; Zhang, Tong;Project: EC | ACCLIMATE (339108), ANR | TROIS-AS (ANR-15-CE01-0005), EC | NACLIM (308299), NSF | The Management and Operat... (1852977), NSF | Collaborative Research: E... (1443229)
Ice sheet numerical modeling is an important tool to estimate the dynamic contribution of the Antarctic ice sheet to sea level rise over the coming centuries. The influence of initial conditions on ice sheet model simulations, however, is still unclear. To better understand this influence, an initial state intercomparison exercise (initMIP) has been developed to compare, evaluate, and improve initialization procedures and estimate their impact on century-scale simulations. initMIP is the first set of experiments of the Ice Sheet Model Intercomparison Project for CMIP6 (ISMIP6), which is the primary Coupled Model Intercomparison Project Phase 6 (CMIP6) activity focusing on the Greenland and Antarctic ice sheets. Following initMIP-Greenland, initMIP-Antarctica has been designed to explore uncertainties associated with model initialization and spin-up and to evaluate the impact of changes in external forcings. Starting from the state of the Antarctic ice sheet at the end of the initialization procedure, three forward experiments are each run for 100 years: a control run, a run with a surface mass balance anomaly, and a run with a basal melting anomaly beneath floating ice. This study presents the results of initMIP-Antarctica from 25 simulations performed by 16 international modeling groups. The submitted results use different initial conditions and initialization methods, as well as ice flow model parameters and reference external forcings. We find a good agreement among model responses to the surface mass balance anomaly but large variations in responses to the basal melting anomaly. These variations can be attributed to differences in the extent of ice shelves and their upstream tributaries, the numerical treatment of grounding line, and the initial ocean conditions applied, suggesting that ongoing efforts to better represent ice shelves in continental-scale models should continue.
- Other research product . 2019Open Access EnglishAuthors:Geerlings, Nicole M. J.; Zetsche, Eva-Maria; Hidalgo-Martinez, Silvia; Middelburg, Jack J.; Meysman, Filip J. R.;Geerlings, Nicole M. J.; Zetsche, Eva-Maria; Hidalgo-Martinez, Silvia; Middelburg, Jack J.; Meysman, Filip J. R.;Project: EC | SEDBIOGEOCHEM2.0 (306933), EC | BIPHA (660481), NWO | The impact of cable bacte... (12983)
Cable bacteria are multicellular, filamentous microorganisms that are capable of transporting electrons over centimeter-scale distances. Although recently discovered, these bacteria appear to be widely present in the seafloor, and when active they exert a strong imprint on the local geochemistry. In particular, their electrogenic metabolism induces unusually strong pH excursions in aquatic sediments, which induces considerable mineral dissolution, and subsequent mineral reprecipitation. However, at present, it is unknown whether and how cable bacteria play an active or direct role in the mineral reprecipitation process. To this end we present an explorative study of the formation of sedimentary minerals in and near filamentous cable bacteria using a combined approach of electron microscopy and spectroscopic techniques. Our observations reveal the formation of polyphosphate granules within the cells and two different types of biomineral formation directly associated with multicellular filaments of these cable bacteria: (i) the attachment and incorporation of clay particles in a coating surrounding the bacteria and (ii) encrustation of the cell envelope by iron minerals. These findings suggest a complex interaction between cable bacteria and the surrounding sediment matrix, and a substantial imprint of the electrogenic metabolism on mineral diagenesis and sedimentary biogeochemical cycling. In particular, the encrustation process leaves many open questions for further research. For example, we hypothesize that the complete encrustation of filaments might create a diffusion barrier and negatively impact the metabolism of the cable bacteria.
- Other research product . Collection . 2019Open Access EnglishAuthors:Carini, Alessia; Koudelka, Tomas; Tholey, Andreas; Appel, Esther; Gorb, Stanislav N; Melzner, Frank; Ramesh, Kirti;Carini, Alessia; Koudelka, Tomas; Tholey, Andreas; Appel, Esther; Gorb, Stanislav N; Melzner, Frank; Ramesh, Kirti;Publisher: PANGAEAProject: EC | CACHE (605051)
These datasets comprise laboratory measurements of salinity, pH, temperature and larval mortality in seawater during blue mussel larval culture for shell proteomics. In addition, shell area and shell length as measured using ImageJ for photos taken with an FEI Phenom-World desktop SEM and a Leica M165 FC stereomicroscope, respectively, are reported. The shell area measurements were used to assess the quality of the shell cleaning method prior to shell proteomics. The shell length data were used to assess phenotypic similarities between mussel families prior to larval shell proteomics.
- Other research product . Collection . 2019Open Access EnglishAuthors:De Clippele, Laurence Helene; Huvenne, Veerle A I; Orejas, Covadonga; Lundälv, Tomas; Fox, Alan; Hennige, Sebastian J; Roberts, J Murray;De Clippele, Laurence Helene; Huvenne, Veerle A I; Orejas, Covadonga; Lundälv, Tomas; Fox, Alan; Hennige, Sebastian J; Roberts, J Murray;Publisher: PANGAEAProject: EC | ASSEMBLE (227799), EC | ATLAS (678760), EC | CODEMAP (258482), UKRI | Coral pH regulation and c... (NE/K009028/2), UKRI | Coral pH regulation and c... (NE/K009028/1)
This data was used in a study that demonstrates how cold-water coral morphology and habitat distribution are shaped by local hydrodynamics, using high-definition video from Tisler Reef, an inshore reef in Norway. A total of 334 video frames collected on the north-west (NW) and south-east (SE) side of the reef were investigated for Lophelia pertusa coral cover and morphology and for the cover of the associated sponges Mycale lingua and Geodia sp. Our results showed that the SE side was a better habitat for L. pertusa (including live and dead colonies). Low cover of Geodia sp. was found on both sides of Tisler Reef. In contrast, Mycale lingua had higher percentage cover, especially on the NW side of the reef. Bush-shaped colonies of L. pertusa with elongated branches were the most abundant coral morphology on Tisler Reef. The highest abundance and density of this morphology were found on the SE side of the reef, while a higher proportion of cauliflower-shaped corals with short branches were found on the NW side. The proportion of very small L. pertusa colonies was also significantly higher on the SE side of the reef. The patterns in coral spatial distribution and morphology were related to local hydrodynamics—there were more frequent periods of downwelling currents on the SE side—and to the availability of suitable settling substrates. These factors make the SE region of Tisler Reef more suitable for coral growth. Understanding the impact of local hydrodynamics on the spatial extent and morphology of coral, and their relation to associated organisms such as sponges, is key to understanding the past and future development of the reef.
16 Research products, page 1 of 2
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- Other research product . 2021Open Access EnglishAuthors:Clyne, Margot; Lamarque, Jean-Francois; Mills, Michael J.; Khodri, Myriam; Ball, William; Bekki, Slimane; Dhomse, Sandip S.; Lebas, Nicolas; Mann, Graham; Marshall, Lauren; +13 moreClyne, Margot; Lamarque, Jean-Francois; Mills, Michael J.; Khodri, Myriam; Ball, William; Bekki, Slimane; Dhomse, Sandip S.; Lebas, Nicolas; Mann, Graham; Marshall, Lauren; Niemeier, Ulrike; Poulain, Virginie; Robock, Alan; Rozanov, Eugene; Schmidt, Anja; Stenke, Andrea; Sukhodolov, Timofei; Timmreck, Claudia; Toohey, Matthew; Tummon, Fiona; Zanchettin, Davide; Zhu, Yunqian; Toon, Owen B.;Project: NSF | Decadal Prediction Follow... (1430051), SNSF | SPARC International Proje... (138017), UKRI | The North Atlantic Climat... (NE/N018001/1), EC | STRATOCLIM (603557), UKRI | Reconciling Volcanic Forc... (NE/S000887/1)
As part of the Model Intercomparison Project on the climatic response to Volcanic forcing (VolMIP), several climate modeling centers performed a coordinated pre-study experiment with interactive stratospheric aerosol models simulating the volcanic aerosol cloud from an eruption resembling the 1815 Mt. Tambora eruption (VolMIP-Tambora ISA ensemble). The pre-study provided the ancillary ability to assess intermodel diversity in the radiative forcing for a large stratospheric-injecting equatorial eruption when the volcanic aerosol cloud is simulated interactively. An initial analysis of the VolMIP-Tambora ISA ensemble showed large disparities between models in the stratospheric global mean aerosol optical depth (AOD). In this study, we now show that stratospheric global mean AOD differences among the participating models are primarily due to differences in aerosol size, which we track here by effective radius. We identify specific physical and chemical processes that are missing in some models and/or parameterized differently between models, which are together causing the differences in effective radius. In particular, our analysis indicates that interactively tracking hydroxyl radical (OH) chemistry following a large volcanic injection of sulfur dioxide (SO2) is an important factor in allowing for the timescale for sulfate formation to be properly simulated. In addition, depending on the timescale of sulfate formation, there can be a large difference in effective radius and subsequently AOD that results from whether the SO2 is injected in a single model grid cell near the location of the volcanic eruption, or whether it is injected as a longitudinally averaged band around the Earth.
- Other research product . 2020Open Access EnglishAuthors:Helmond, Niels A. G. M.; Robertson, Elizabeth K.; Conley, Daniel J.; Hermans, Martijn; Humborg, Christoph; Kubeneck, L. Joëlle; Lenstra, Wytze K.; Slomp, Caroline P.;Helmond, Niels A. G. M.; Robertson, Elizabeth K.; Conley, Daniel J.; Hermans, Martijn; Humborg, Christoph; Kubeneck, L. Joëlle; Lenstra, Wytze K.; Slomp, Caroline P.;Project: NWO | Response of the Iron Biog... (11124), EC | PHOXY (278364)
Coastal systems can act as filters for anthropogenic nutrient input into marine environments. Here, we assess the processes controlling the removal of phosphorus (P) and nitrogen (N) for four sites in the eutrophic Stockholm archipelago. Bottom water concentrations of oxygen (O2) and P are inversely correlated. This is attributed to the seasonal release of P from iron-oxide-bound (Fe-oxide-bound) P in surface sediments and from degrading organic matter. The abundant presence of sulfide in the pore water and its high upward flux towards the sediment surface (∼4 to 8 mmol m−2 d−1), linked to prior deposition of organic-rich sediments in a low-O2 setting (“legacy of hypoxia”), hinder the formation of a larger Fe-oxide-bound P pool in winter. This is most pronounced at sites where water column mixing is naturally relatively low and where low bottom water O2 concentrations prevail in summer. Burial rates of P are high at all sites (0.03–0.3 mol m−2 yr−1), a combined result of high sedimentation rates (0.5 to 3.5 cm yr−1) and high sedimentary P at depth (∼30 to 50 µmol g−1). Sedimentary P is dominated by Fe-bound P and organic P at the sediment surface and by organic P, authigenic Ca-P and detrital P at depth. Apart from one site in the inner archipelago, where a vivianite-type Fe(II)-P mineral is likely present at depth, there is little evidence for sink switching of organic or Fe-oxide-bound P to authigenic P minerals. Denitrification is the major benthic nitrate-reducing process at all sites (0.09 to 1.7 mmol m−2 d−1) with rates decreasing seaward from the inner to outer archipelago. Our results explain how sediments in this eutrophic coastal system can remove P through burial at a relatively high rate, regardless of whether the bottom waters are oxic or (frequently) hypoxic. Our results suggest that benthic N processes undergo annual cycles of removal and recycling in response to hypoxic conditions. Further nutrient load reductions are expected to contribute to the recovery of the eutrophic Stockholm archipelago from hypoxia. Based on the dominant pathways of P and N removal identified in this study, it is expected that the sediments will continue to remove part of the P and N loads.
- Other research product . 2020Open Access EnglishAuthors:Hopwood, Mark J.; Sanchez, Nicolas; Polyviou, Despo; Leiknes, Øystein; Gallego-Urrea, Julián Alberto; Achterberg, Eric P.; Ardelan, Murat V.; Aristegui, Javier; Bach, Lennart; Besiktepe, Sengul; +6 moreHopwood, Mark J.; Sanchez, Nicolas; Polyviou, Despo; Leiknes, Øystein; Gallego-Urrea, Julián Alberto; Achterberg, Eric P.; Ardelan, Murat V.; Aristegui, Javier; Bach, Lennart; Besiktepe, Sengul; Heriot, Yohann; Kalantzi, Ioanna; Terbıyık Kurt, Tuba; Santi, Ioulia; Tsagaraki, Tatiana M.; Turner, David;Project: EC | OCEAN-CERTAIN (603773)
The extracellular concentration of H2O2 in surface aquatic environments is controlled by a balance between photochemical production and the microbial synthesis of catalase and peroxidase enzymes to remove H2O2 from solution. In any kind of incubation experiment, the formation rates and equilibrium concentrations of reactive oxygen species (ROSs) such as H2O2 may be sensitive to both the experiment design, particularly to the regulation of incident light, and the abundance of different microbial groups, as both cellular H2O2 production and catalase–peroxidase enzyme production rates differ between species. Whilst there are extensive measurements of photochemical H2O2 formation rates and the distribution of H2O2 in the marine environment, it is poorly constrained how different microbial groups affect extracellular H2O2 concentrations, how comparable extracellular H2O2 concentrations within large-scale incubation experiments are to those observed in the surface-mixed layer, and to what extent a mismatch with environmentally relevant concentrations of ROS in incubations could influence biological processes differently to what would be observed in nature. Here we show that both experiment design and bacterial abundance consistently exert control on extracellular H2O2 concentrations across a range of incubation experiments in diverse marine environments. During four large-scale (>1000 L) mesocosm experiments (in Gran Canaria, the Mediterranean, Patagonia and Svalbard) most experimental factors appeared to exert only minor, or no, direct effect on H2O2 concentrations. For example, in three of four experiments where pH was manipulated to 0.4–0.5 below ambient pH, no significant change was evident in extracellular H2O2 concentrations relative to controls. An influence was sometimes inferred from zooplankton density, but not consistently between different incubation experiments, and no change in H2O2 was evident in controlled experiments using different densities of the copepod Calanus finmarchicus grazing on the diatom Skeletonema costatum (<1 % change in [H2O2] comparing copepod densities from 1 to 10 L−1). Instead, the changes in H2O2 concentration contrasting high- and low-zooplankton incubations appeared to arise from the resulting changes in bacterial activity. The correlation between bacterial abundance and extracellular H2O2 was stronger in some incubations than others (R2 range 0.09 to 0.55), yet high bacterial densities were consistently associated with low H2O2. Nonetheless, the main control on H2O2 concentrations during incubation experiments relative to those in ambient, unenclosed waters was the regulation of incident light. In an open (lidless) mesocosm experiment in Gran Canaria, H2O2 was persistently elevated (2–6-fold) above ambient concentrations; whereas using closed high-density polyethylene mesocosms in Crete, Svalbard and Patagonia H2O2 within incubations was always reduced (median 10 %–90 %) relative to ambient waters.
- Other research product . Other ORP type . 2020Open Access EnglishAuthors:Hopwood, Mark J.; Santana-González, Carolina; Gallego-Urrea, Julian; Sanchez, Nicolas; Achterberg, Eric P.; Ardelan, Murat V.; Gledhill, Martha; González-Dávila, Melchor; Hoffmann, Linn; Leiknes, Øystein; +3 moreHopwood, Mark J.; Santana-González, Carolina; Gallego-Urrea, Julian; Sanchez, Nicolas; Achterberg, Eric P.; Ardelan, Murat V.; Gledhill, Martha; González-Dávila, Melchor; Hoffmann, Linn; Leiknes, Øystein; Santana-Casiano, Juana Magdalena; Tsagaraki, Tatiana M.; Turner, David;Publisher: Copernicus Publications under license by EGUProject: EC | OCEAN-CERTAIN (603773)
The speciation of dissolved iron (DFe) in the ocean is widely assumed to consist almost exclusively of Fe(III)-ligand complexes. Yet in most aqueous environments a poorly defined fraction of DFe also exists as Fe(II), the speciation of which is uncertain. Here we deploy flow injection analysis to measure in situ Fe(II) concentrations during a series of mesocosm/microcosm/multistressor experiments in coastal environments in addition to the decay rate of this Fe(II) when moved into the dark. During five mesocosm/microcosm/multistressor experiments in Svalbard and Patagonia, where dissolved (0.2 µm) Fe and Fe(II) were quantified simultaneously, Fe(II) constituted 24 %–65 % of DFe, suggesting that Fe(II) was a large fraction of the DFe pool. When this Fe(II) was allowed to decay in the dark, the vast majority of measured oxidation rate constants were less than calculated constants derived from ambient temperature, salinity, pH, and dissolved O2. The oxidation rates of Fe(II) spikes added to Atlantic seawater more closely matched calculated rate constants. The difference between observed and theoretical decay rates in Svalbard and Patagonia was most pronounced at Fe(II) concentrations <2 nM, suggesting that the effect may have arisen from organic Fe(II) ligands. This apparent enhancement of Fe(II) stability under post-bloom conditions and the existence of such a high fraction of DFe as Fe(II) challenge the assumption that DFe speciation in coastal seawater is dominated by ligand bound-Fe(III) species.
- Other research product . Collection . 2020Open Access EnglishAuthors:Sanchez, Nicolas; Leiknes, Øystein; Tsagaraki, Tatiana M; Hopwood, Mark James; Gallego-Urrea, J; Kuttivadakkethil Avarachen, Mathew; Cuevas, L Antonio; Kankus, Janset; King, Andrew L; Reggiani, Emanuele Roberto; +18 moreSanchez, Nicolas; Leiknes, Øystein; Tsagaraki, Tatiana M; Hopwood, Mark James; Gallego-Urrea, J; Kuttivadakkethil Avarachen, Mathew; Cuevas, L Antonio; Kankus, Janset; King, Andrew L; Reggiani, Emanuele Roberto; Bratbak, Gunnar; Larsen, Aud; Sandaa, Ruth-Anne; Egge, Jorun K; Turner, David; Besiktepe, Sengul; Bizsel, Kemal Can; Bizsel, Nihayet; Iriarte, Jose Luis; González, Humberto; Torres, Rodrigo; Bellerby, Richard G J; Thingstad, Tron Frede; Hoffmann, Linn; Achterberg, Eric Pieter; Vadstein, Olav; Olsen, Yngvar; Ardelan, Murat V;Publisher: PANGAEAProject: EC | OCEAN-CERTAIN (603773)
The data-sets comes from three locations representative of three different marine ecosystems: Fjord (Chilean Patagonia), Ny-Ålesund (Arctic) and Mediterranean (Crete). It contains chemical and biological data collected in three mesocosm and four microcosm experiments conducted in the spring - summer period, in which the physico-chemical (pH, Carbon) and biological (grazing) conditions were altered to represent potential future climate change scenarios. The data-sets contains measurements in: carbonate chemistry, macro- and micro-nutrients concentrations, primary production, phytoplankton taxonomy, virus abundance, bacterial production, bacterial abundance, Zoo- and microzoo-plankton abundance, grazing rates for different taxonomic groups.
- Other research product . 2019Open Access EnglishAuthors:Maffezzoli, Niccolò; Vallelonga, Paul; Edwards, Ross; Saiz-Lopez, Alfonso; Turetta, Clara; Kjær, Helle Astrid; Barbante, Carlo; Vinther, Bo; Spolaor, Andrea;Maffezzoli, Niccolò; Vallelonga, Paul; Edwards, Ross; Saiz-Lopez, Alfonso; Turetta, Clara; Kjær, Helle Astrid; Barbante, Carlo; Vinther, Bo; Spolaor, Andrea;Project: EC | ICE2ICE (610055), EC | CLIMAHAL (726349)
Although it has been demonstrated that the speed and magnitude of the recent Arctic sea ice decline is unprecedented for the past 1450 years, few records are available to provide a paleoclimate context for Arctic sea ice extent. Bromine enrichment in ice cores has been suggested to indicate the extent of newly formed sea ice areas. Despite the similarities among sea ice indicators and ice core bromine enrichment records, uncertainties still exist regarding the quantitative linkages between bromine reactive chemistry and the first-year sea ice surfaces. Here we present a 120 000-year record of bromine enrichment from the RECAP (REnland ice CAP) ice core, coastal east Greenland, and interpret it as a record of first-year sea ice. We compare it to existing sea ice records from marine cores and tentatively reconstruct past sea ice conditions in the North Atlantic as far north as the Fram Strait (50–85∘ N). Our interpretation implies that during the last deglaciation, the transition from multi-year to first-year sea ice started at ∼17.5 ka, synchronously with sea ice reductions observed in the eastern Nordic Seas and with the increase in North Atlantic ocean temperature. First-year sea ice reached its maximum at 12.4–11.8 ka during the Younger Dryas, after which open-water conditions started to dominate, consistent with sea ice records from the eastern Nordic Seas and the North Icelandic shelf. Our results show that over the last 120 000 years, multi-year sea ice extent was greatest during Marine Isotope Stage (MIS) 2 and possibly during MIS 4, with more extended first-year sea ice during MIS 3 and MIS 5. Sea ice extent during the Holocene (MIS 1) has been less than at any time in the last 120 000 years.
- Other research product . 2019Open Access EnglishAuthors:Seroussi, Hélène; Nowicki, Sophie; Simon, Erika; Abe-Ouchi, Ayako; Albrecht, Torsten; Brondex, Julien; Cornford, Stephen; Dumas, Christophe; Gillet-Chaulet, Fabien; Goelzer, Heiko; +29 moreSeroussi, Hélène; Nowicki, Sophie; Simon, Erika; Abe-Ouchi, Ayako; Albrecht, Torsten; Brondex, Julien; Cornford, Stephen; Dumas, Christophe; Gillet-Chaulet, Fabien; Goelzer, Heiko; Golledge, Nicholas R.; Gregory, Jonathan M.; Greve, Ralf; Hoffman, Matthew J.; Humbert, Angelika; Huybrechts, Philippe; Kleiner, Thomas; Larour, Eric; Leguy, Gunter; Lipscomb, William H.; Lowry, Daniel; Mengel, Matthias; Morlighem, Mathieu; Pattyn, Frank; Payne, Anthony J.; Pollard, David; Price, Stephen F.; Quiquet, Aurélien; Reerink, Thomas J.; Reese, Ronja; Rodehacke, Christian B.; Schlegel, Nicole-Jeanne; Shepherd, Andrew; Sun, Sainan; Sutter, Johannes; Breedam, Jonas; Wal, Roderik S. W.; Winkelmann, Ricarda; Zhang, Tong;Project: EC | ACCLIMATE (339108), ANR | TROIS-AS (ANR-15-CE01-0005), EC | NACLIM (308299), NSF | The Management and Operat... (1852977), NSF | Collaborative Research: E... (1443229)
Ice sheet numerical modeling is an important tool to estimate the dynamic contribution of the Antarctic ice sheet to sea level rise over the coming centuries. The influence of initial conditions on ice sheet model simulations, however, is still unclear. To better understand this influence, an initial state intercomparison exercise (initMIP) has been developed to compare, evaluate, and improve initialization procedures and estimate their impact on century-scale simulations. initMIP is the first set of experiments of the Ice Sheet Model Intercomparison Project for CMIP6 (ISMIP6), which is the primary Coupled Model Intercomparison Project Phase 6 (CMIP6) activity focusing on the Greenland and Antarctic ice sheets. Following initMIP-Greenland, initMIP-Antarctica has been designed to explore uncertainties associated with model initialization and spin-up and to evaluate the impact of changes in external forcings. Starting from the state of the Antarctic ice sheet at the end of the initialization procedure, three forward experiments are each run for 100 years: a control run, a run with a surface mass balance anomaly, and a run with a basal melting anomaly beneath floating ice. This study presents the results of initMIP-Antarctica from 25 simulations performed by 16 international modeling groups. The submitted results use different initial conditions and initialization methods, as well as ice flow model parameters and reference external forcings. We find a good agreement among model responses to the surface mass balance anomaly but large variations in responses to the basal melting anomaly. These variations can be attributed to differences in the extent of ice shelves and their upstream tributaries, the numerical treatment of grounding line, and the initial ocean conditions applied, suggesting that ongoing efforts to better represent ice shelves in continental-scale models should continue.
- Other research product . 2019Open Access EnglishAuthors:Geerlings, Nicole M. J.; Zetsche, Eva-Maria; Hidalgo-Martinez, Silvia; Middelburg, Jack J.; Meysman, Filip J. R.;Geerlings, Nicole M. J.; Zetsche, Eva-Maria; Hidalgo-Martinez, Silvia; Middelburg, Jack J.; Meysman, Filip J. R.;Project: EC | SEDBIOGEOCHEM2.0 (306933), EC | BIPHA (660481), NWO | The impact of cable bacte... (12983)
Cable bacteria are multicellular, filamentous microorganisms that are capable of transporting electrons over centimeter-scale distances. Although recently discovered, these bacteria appear to be widely present in the seafloor, and when active they exert a strong imprint on the local geochemistry. In particular, their electrogenic metabolism induces unusually strong pH excursions in aquatic sediments, which induces considerable mineral dissolution, and subsequent mineral reprecipitation. However, at present, it is unknown whether and how cable bacteria play an active or direct role in the mineral reprecipitation process. To this end we present an explorative study of the formation of sedimentary minerals in and near filamentous cable bacteria using a combined approach of electron microscopy and spectroscopic techniques. Our observations reveal the formation of polyphosphate granules within the cells and two different types of biomineral formation directly associated with multicellular filaments of these cable bacteria: (i) the attachment and incorporation of clay particles in a coating surrounding the bacteria and (ii) encrustation of the cell envelope by iron minerals. These findings suggest a complex interaction between cable bacteria and the surrounding sediment matrix, and a substantial imprint of the electrogenic metabolism on mineral diagenesis and sedimentary biogeochemical cycling. In particular, the encrustation process leaves many open questions for further research. For example, we hypothesize that the complete encrustation of filaments might create a diffusion barrier and negatively impact the metabolism of the cable bacteria.
- Other research product . Collection . 2019Open Access EnglishAuthors:Carini, Alessia; Koudelka, Tomas; Tholey, Andreas; Appel, Esther; Gorb, Stanislav N; Melzner, Frank; Ramesh, Kirti;Carini, Alessia; Koudelka, Tomas; Tholey, Andreas; Appel, Esther; Gorb, Stanislav N; Melzner, Frank; Ramesh, Kirti;Publisher: PANGAEAProject: EC | CACHE (605051)
These datasets comprise laboratory measurements of salinity, pH, temperature and larval mortality in seawater during blue mussel larval culture for shell proteomics. In addition, shell area and shell length as measured using ImageJ for photos taken with an FEI Phenom-World desktop SEM and a Leica M165 FC stereomicroscope, respectively, are reported. The shell area measurements were used to assess the quality of the shell cleaning method prior to shell proteomics. The shell length data were used to assess phenotypic similarities between mussel families prior to larval shell proteomics.
- Other research product . Collection . 2019Open Access EnglishAuthors:De Clippele, Laurence Helene; Huvenne, Veerle A I; Orejas, Covadonga; Lundälv, Tomas; Fox, Alan; Hennige, Sebastian J; Roberts, J Murray;De Clippele, Laurence Helene; Huvenne, Veerle A I; Orejas, Covadonga; Lundälv, Tomas; Fox, Alan; Hennige, Sebastian J; Roberts, J Murray;Publisher: PANGAEAProject: EC | ASSEMBLE (227799), EC | ATLAS (678760), EC | CODEMAP (258482), UKRI | Coral pH regulation and c... (NE/K009028/2), UKRI | Coral pH regulation and c... (NE/K009028/1)
This data was used in a study that demonstrates how cold-water coral morphology and habitat distribution are shaped by local hydrodynamics, using high-definition video from Tisler Reef, an inshore reef in Norway. A total of 334 video frames collected on the north-west (NW) and south-east (SE) side of the reef were investigated for Lophelia pertusa coral cover and morphology and for the cover of the associated sponges Mycale lingua and Geodia sp. Our results showed that the SE side was a better habitat for L. pertusa (including live and dead colonies). Low cover of Geodia sp. was found on both sides of Tisler Reef. In contrast, Mycale lingua had higher percentage cover, especially on the NW side of the reef. Bush-shaped colonies of L. pertusa with elongated branches were the most abundant coral morphology on Tisler Reef. The highest abundance and density of this morphology were found on the SE side of the reef, while a higher proportion of cauliflower-shaped corals with short branches were found on the NW side. The proportion of very small L. pertusa colonies was also significantly higher on the SE side of the reef. The patterns in coral spatial distribution and morphology were related to local hydrodynamics—there were more frequent periods of downwelling currents on the SE side—and to the availability of suitable settling substrates. These factors make the SE region of Tisler Reef more suitable for coral growth. Understanding the impact of local hydrodynamics on the spatial extent and morphology of coral, and their relation to associated organisms such as sponges, is key to understanding the past and future development of the reef.