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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Bartsch, Annett; Nitze, Ingmar;

    {"references": ["Nitze, I., Grosse, G., Jones, B., Arp, C., Ulrich, M., Fedorov, A., et al. (2017). Landsat-based trend analysis of lake dynamics across northern permafrost regions. Remote Sens. 9:640. doi: 10.3390/rs9070640", "Nitze, I., Grosse, G., Jones, B. M., Romanovsky, V. E., and Boike, J. (2018). Remote sensing quantifies widespread abundance of permafrost region disturbances across the Arctic and Subarctic. Nat. Commun. 9:5423. doi: 10.1038/s41467-018-07663-3", "Bartsch A, Ley S, Nitze I, Pointner G and Vieira G (2020) Feasibility Study for the Application of Synthetic Aperture Radar for Coastal Erosion Rate Quantification Across the Arctic. Front. Environ. Sci. 8:143. doi: 10.3389/fenvs.2020.00143"]} The dataset covers the Laptev Sea coast from 120 to 168 E and Alaska and Canadian Beaufort Sea Coast from 130 to 168 W. Probabilities of erosion and accretion (change of land to water and visa versa) have been derived from Landsat for the time period 1999–2014. A probability threshold of 50% was applied to separate erosion and accretion areas which are provided as polygons (shape files). Further information regarding the algorithm is available in Bartsch et al. (2020). The authors acknowledge financial support by the HORIZON2020 (BG-2017-1) project Nunataryuk, ESA's DUE GlobPermafrost project (Contract Number 4000116196/15/INB) and ESA's CCI+ Permafrost (4000123681/18/I-NB) project.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: Datacite
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: ZENODO
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: Datacite
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: ZENODO
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Bartsch, Annett; Pointner, Georg; Nitze, Ingmar;

    {"references": ["Bartsch, A., Pointner, G., Ingeman-Nielsen, T. & Lu, W. (2020), 'Towards circumpolar mapping of Arctic settlements and infrastructure based on Sentinel-1 and Sentinel-2', Remote Sensing 12(15), 2368.", "Elvidge, C. D., Zhizhin, M., Ghosh, T., Hsu, F.-C. & Taneja, J. (2021), 'Annual time series of global VIIRS nighttime lights derived from monthly averages: 2012 to 2019',Remote Sensing13(5), 922", "Obu, J., Westermann, S., Barboux, C., Bartsch, A., Delaloye, R., Grosse, G., Heim, B., Hugelius,G., Irrgang, A., K\u00e4\u00e4b, A. M., Kroisleitner, C., Matthes, H., Nitze, I., Pellet, C., Seifert, F. M., Strozzi, T., Wegm\u00fcller, U., Wieczorek, M. & Wiesmann, A. (2021a), 'ESA Permafrost Climate Change Initiative (permafrost_cci): Permafrost active layer thickness for the Northern Hemisphere, v3.0'.", "Obu, J., Westermann, S., Barboux, C., Bartsch, A., Delaloye, R., Grosse, G., Heim, B., Hugelius, G.,Irrgang, A., K\u00e4\u00e4b, A. M., Kroisleitner, C., Matthes, H., Nitze, I., Pellet, C., Seifert, F. M.,Strozzi, T., Wegm \u00fcller, U., Wieczorek, M. & Wiesmann, A. (2021b), 'ESA Permafrost Climate Change Initiative (permafrost_cci): Permafrost extent for the Northern Hemisphere, v3.0'.", "Obu, J., Westermann, S., Barboux, C., Bartsch, A., Delaloye, R., Grosse, G., Heim, B., Hugelius,G., Irrgang, A., K\u00e4\u00e4b, A. M., Kroisleitner, C., Matthes, H., Nitze, I., Pellet, C., Seifert,F. M., Strozzi, T., Wegm\u00fcller, U., Wieczorek, M. & Wiesmann, A. (2021c), 'ESA Permafrost Climate Change Initiative (permafrost_cci): Permafrost ground temperature for the Northern Hemisphere, v3.0", "Wang, S., Ramage, J., Bartsch, A. & Efimova, A. (2021), 'Population in the arctic circumpolar permafrost region at settlement level', Zenodo. 10.5281/ZENODO.45296", "Martha K. Raynolds, Donald A. Walker, Andrew Balser, Christian Bay, Mitch Campbell, Mikhail M. Cherosov, Fred J.A. Dani\u00ebls, Pernille Bronken Eidesen, Ksenia A. Ermokhina, Gerald V. Frost, Birgit Jedrzejek, M. Torre Jorgenson, Blair E. Kennedy, Sergei S. Kholod, Igor A. Lavrinenko, Olga V. Lavrinenko, Borg\u00fe\u00f3r Magn\u00fasson, Nadezhda V. Matveyeva, Sigmar Met\u00fasalemsson, Lennart Nilsen, Ian Olthof, Igor N. Pospelov, Elena B. Pospelova, Darren Pouliot, Vladimir Razzhivin, Gabriela Schaepman-Strub, Jozef \u0160ib\u00edk, Mikhail Yu. Telyatnikov, Elena Troeva (2019): 'A raster version of the Circumpolar Arctic Vegetation Map (CAVM)', Remote Sensing of Environment, Volume 232, 111297.", "Nitze, I., Grosse, G., Jones, B. M., Romanovsky, V. E. & Boike, J. (2018), 'Remote sensing quantifies widespread abundance of permafrost region disturbances across the Arctic and Subarctic', Nature Communications 9(1).", "Bartsch et al. (2021), Expanding infrastructure and growing anthropogenic impacts along Arctic coasts, ERL\u00a0https://iopscience.iop.org/article/10.1088/1748-9326/ac3176/meta"]} The SACHI (Sentinel-1/2 derived Arctic Coastal Human Impact) dataset has been primarily developed as part of the HORIZON2020 project Nunataryuk by b.geos (www.bgeos.com). It covers a 100km buffer from the Arctic Coast (land area), for areas with permafrost near the coast. It is based on Sentinel-1 and Sentinel-2 data from 2016-2020 using the algorithms described in Bartsch et al. (2020). It is a supplement to Bartsch et al. (2021 - https://iopscience.iop.org/article/10.1088/1748-9326/ac3176/meta). It consists of three shape files: 1) SACHI.shp - all identified objects with infrastructure/impact classes and auxiliary information (permafrost status and trends, nightlight radiance, vegetation zone, Normalized Difference Vegetation Index trends from Landsat, settlements names) 2) SACHI_100km_buffer - Buffer polygon (analyses extent) 3) SACHI_granules_acquisition_dates - processed Sentinel-2 granule extent polygons with dates of all used input data SACHI class values: 1=linear transport infrastructure, 2=buildings (and other constructions such as bridges), 3=other impacted area (includes gravel pads, mining sites) See README.TXT for description of data fields. Further support was received by ESA CCI+ Permafrost, HGF AI-CORE, and NSF Permafrost DiscoveryGateway. The processing scheme was developed on a highly performant virtual machine (VM) provided by the Copernicus Research and User Support (RUS). Results are based on modified Copernicus data from 2016 to 2020.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: ZENODO
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: Datacite
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: ZENODO
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: Datacite
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Richter, Kristine Korzow; Maccarinelli, Angela; Harland, Jen; Bottomley, Zoe; +2 Authors

    Images from all 46 archaeological test bones associated with the archaeological test set MALDI-TOF data. MALDI-TOF data from both reference and test sets. Reference sets are labeled with their species identification. Each set consists of .tex files. Files in the same folder are technical replicates of the same extract.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2019
    Data sources: ZENODO
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2019
    Data sources: Datacite
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2019
      Data sources: ZENODO
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2019
      Data sources: Datacite
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Capet Arthur; Vandenbulcke Luc; Grégoire Marilaure;

    Data files provided in support of 'Global warming triggered a reduced and intermittent ventilation regime in the Black Sea', by Capet et al, 2018. Black_Sea_CIL_Cold_Content_Annual.nc contains the spatial and annual averages of the Black Sea cold intermediate layer cold content, as defined in the above reference, and derived from multiple in-situ and modelling sources, for the period (1955-2017). Black_Sea_CIL_Cold_Content_Weekly.nc contains the spatial and weekly averages of the Black Sea cold intermediate layer cold content, as defined in the above reference, and derived from the GHER3D model, for the period (1981-2017).

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2018
    Data sources: ZENODO
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2018
      Data sources: ZENODO
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Toohey, Matthew; Sigl, Michael;

    Project: Earth System Model Forcing and Verification - The project consolidates data entities which are suitable to force and/or to verify Earth system models. The archived data entities contain data and data products mainly from observations or reconstruction. The eVolv2k project is supported by the Deutsche Forschungsgemeinschaft (DFG) in the framework of the priority programme “Antarctic Research with comparative investigations in Arctic ice areas” through grant TO 967/1-1. Summary: The eVolv2k database includes estimates of the magnitudes and approximate source latitudes of major volcanic stratospheric sulphur injection (VSSI) events from 500 BCE to 1900 CE. The VSSI estimates incorporate recent improvements to the ice core records in terms of synchronization and dating, refinements to the methods used to estimate VSSI from ice core records, and includes first estimates of the random uncertainties in VSSI values. Ice core-derived volcanic sulfate deposition composites for Antarctica (Sigl et al., 2014) and Greenland (Sigl et al., 2015, Zielinski et al., 1995) are scaled to volcanic stratospheric sulfur injection based on a method similar to that of Gao et al. (2007). More details to be published in a forthcoming article (Toohey and Sigl, in prep). Compared to version 1, this version (1) contains estimates of the random error in the VSSI estimates, (2) includes a clarification regarding the format of years in the BCE period by including both years BCE/CE and according to the ISO 8601 standard (which includes a year 0), and (3) includes some minor modifications to the VSSI values. In addition, a reconstruction of stratospheric aerosol optical depth (AOD) using the VSSI estimates and the EVA v1 volcanic forcing generator (Toohey et al., 2016) is provided. Complete optical properties (extinction, single scattering albedo, scattering asymmetry factor) as a function of height, latitude and time can be produced using the eVolv2k VSSI database and the EVA forcing generator. Gao, C., Oman, L., Robock, A. and Stenchikov, G. L.: Atmospheric volcanic loading derived from bipolar ice cores: Accounting for the spatial distribution of volcanic deposition, J. Geophys. Res., 112(D9), doi:10.1029/2006JD007461, 2007. Sigl, M., Winstrup, M., McConnell, J. R., Welten, K. C., Plunkett, G., Ludlow, F., Büntgen, U., Caffee, M., Chellman, N., Dahl-Jensen, D., Fischer, H., Kipfstuhl, S., Kostick, C., Maselli, O. J., Mekhaldi, F., Mulvaney, R., Muscheler, R., Pasteris, D. R., Pilcher, J. R., Salzer, M., Schüpbach, S., Steffensen, J. P., Vinther, B. M. and Woodruff, T. E.: Timing and climate forcing of volcanic eruptions for the past 2,500 years, Nature, 523, 543¿549, doi:10.1038/nature14565, 2015. Sigl, M., McConnell, J. R., Toohey, M., Curran, M., Das, S. B., Edwards, R., Isaksson, E., Kawamura, K., Kipfstuhl, S., Krüger, K., Layman, L., Maselli, O. J., Motizuki, Y., Motoyama, H., Pasteris, D. R. and Severi, M.: Insights from Antarctica on volcanic forcing during the Common Era, Nat. Clim. Chang., 4, 693-697, doi:10.1038/nclimate2293, 2014. Toohey, M. and Sigl, M.: Volcanic stratospheric sulphur injections and aerosol optical depth from 500 BCE to 1900 CE, in preparation. Toohey, M., Stevens, B., Schmidt, H. and Timmreck, C.: Easy Volcanic Aerosol (EVA v1.0): an idealized forcing generator for climate simulations, Geosci. Model Dev., 9(11), 4049–4070, doi:10.5194/GMD-9-4049-2016, 2016. Zielinski, G. A.: Stratospheric loading and optical depth estimates of explosive volcanism over the last 2100 years derived from the Greenland Ice Sheet Project 2 ice core, J. Geophys. Res., 100(D10), 20937–20955, doi:10.1029/95JD01751, 1995.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao World Data Center fo...arrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    World Data Center for Climate
    Dataset . 2017
    Data sources: Datacite
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao World Data Center fo...arrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      World Data Center for Climate
      Dataset . 2017
      Data sources: Datacite
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Pafilis, Evangelos; Pavlopoulos, Georgios; Satagopam, Venkata; Papanikolaou, Nikolas; +5 Authors

    Retrieving all of the necessary information from databases about bioentities mentioned in an article is not a trivial or an easy task. Following the daily literature about a specific biological topic and collecting all the necessary information about the bioentities mentioned in the literature manually is tedious and time consuming. OnTheFly 2.0 is a web application mainly designed for non-computer experts which aims to automate data collection and knowledge extraction from biological literature in a user friendly and efficient way. OnTheFly 2.0 is able to extract bioentities from individual articles such as text, Microsoft Word, Excel and PDF files. With a simple drag-and-drop motion, the text of a document is extensively parsed for bioentities such as protein/gene names and chemical compound names. Utilizing high quality data integration platforms, OnTheFly allows the generation of informative summaries, interaction networks and at-a-glance popup windows containing knowledge related to the bioentities found in documents. OnTheFly 2.0 provides a concise application to automate the extraction of bioentities hidden in various documents and is offered as a web based application.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Open Repository and ...arrow_drop_down
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Open Repository and ...arrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Martinelli M.; Moroni D.; Salvetti O.;

    Based on the idea that contribution of volunteers might play a fundamental role in monitoring and protecting the environment, CNR-ISTI designed and developed a mobile application in order to allow people to timely report oil spills. By downloading the FREE app "ARGO Sentinel" volunteers are helping to monitor the health of our seas and the scientific research by demonstrating that the use of this new technology could be really important to combat pollution. Moreover this experiment suggests that this kind of technology can be applied in many other fields. Whoever at sea sights pollution by oil or hydrocarbons is now able to immediately report the event to the Laboratory of Signals and Images SI-LAB (si.isti.cnr.it) of the Institute of Science and Information Technologies of the Italian National Research Council (CNR-ISTI) in Pisa, allowing the realization of a detailed map of the health of our seas. This information is recorded in the Marine Information System (MIS) produced by CNR, able to collect geotagged data relating to critical and health issues of the sea from various sources (satellites, optical sensors, electronic noses, autonomous underwater vehicles systems) and integrate and generate predictive models to assist the authorities in the management of emergencies at sea. The application, distributed in Italian, English and Greek languages, for smartphones equipped of GPS is an easy to use tool designed for anyone, that for any reason, sail the seas. It allows you to send reports of suspected spills to the CNR specifying the precise point, severity and a description of the spill.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ISTI Open Portalarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ISTI Open Portal
    Other ORP type . 2012
    Data sources: ISTI Open Portal
    CNR ExploRA
    Other ORP type . 2012
    Data sources: CNR ExploRA
    CNR ExploRA
    Other ORP type . 2012
    Data sources: CNR ExploRA
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ISTI Open Portalarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ISTI Open Portal
      Other ORP type . 2012
      Data sources: ISTI Open Portal
      CNR ExploRA
      Other ORP type . 2012
      Data sources: CNR ExploRA
      CNR ExploRA
      Other ORP type . 2012
      Data sources: CNR ExploRA
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7 Research products
  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Bartsch, Annett; Nitze, Ingmar;

    {"references": ["Nitze, I., Grosse, G., Jones, B., Arp, C., Ulrich, M., Fedorov, A., et al. (2017). Landsat-based trend analysis of lake dynamics across northern permafrost regions. Remote Sens. 9:640. doi: 10.3390/rs9070640", "Nitze, I., Grosse, G., Jones, B. M., Romanovsky, V. E., and Boike, J. (2018). Remote sensing quantifies widespread abundance of permafrost region disturbances across the Arctic and Subarctic. Nat. Commun. 9:5423. doi: 10.1038/s41467-018-07663-3", "Bartsch A, Ley S, Nitze I, Pointner G and Vieira G (2020) Feasibility Study for the Application of Synthetic Aperture Radar for Coastal Erosion Rate Quantification Across the Arctic. Front. Environ. Sci. 8:143. doi: 10.3389/fenvs.2020.00143"]} The dataset covers the Laptev Sea coast from 120 to 168 E and Alaska and Canadian Beaufort Sea Coast from 130 to 168 W. Probabilities of erosion and accretion (change of land to water and visa versa) have been derived from Landsat for the time period 1999–2014. A probability threshold of 50% was applied to separate erosion and accretion areas which are provided as polygons (shape files). Further information regarding the algorithm is available in Bartsch et al. (2020). The authors acknowledge financial support by the HORIZON2020 (BG-2017-1) project Nunataryuk, ESA's DUE GlobPermafrost project (Contract Number 4000116196/15/INB) and ESA's CCI+ Permafrost (4000123681/18/I-NB) project.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: Datacite
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: ZENODO
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: Datacite
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: ZENODO
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Bartsch, Annett; Pointner, Georg; Nitze, Ingmar;

    {"references": ["Bartsch, A., Pointner, G., Ingeman-Nielsen, T. & Lu, W. (2020), 'Towards circumpolar mapping of Arctic settlements and infrastructure based on Sentinel-1 and Sentinel-2', Remote Sensing 12(15), 2368.", "Elvidge, C. D., Zhizhin, M., Ghosh, T., Hsu, F.-C. & Taneja, J. (2021), 'Annual time series of global VIIRS nighttime lights derived from monthly averages: 2012 to 2019',Remote Sensing13(5), 922", "Obu, J., Westermann, S., Barboux, C., Bartsch, A., Delaloye, R., Grosse, G., Heim, B., Hugelius,G., Irrgang, A., K\u00e4\u00e4b, A. M., Kroisleitner, C., Matthes, H., Nitze, I., Pellet, C., Seifert, F. M., Strozzi, T., Wegm\u00fcller, U., Wieczorek, M. & Wiesmann, A. (2021a), 'ESA Permafrost Climate Change Initiative (permafrost_cci): Permafrost active layer thickness for the Northern Hemisphere, v3.0'.", "Obu, J., Westermann, S., Barboux, C., Bartsch, A., Delaloye, R., Grosse, G., Heim, B., Hugelius, G.,Irrgang, A., K\u00e4\u00e4b, A. M., Kroisleitner, C., Matthes, H., Nitze, I., Pellet, C., Seifert, F. M.,Strozzi, T., Wegm \u00fcller, U., Wieczorek, M. & Wiesmann, A. (2021b), 'ESA Permafrost Climate Change Initiative (permafrost_cci): Permafrost extent for the Northern Hemisphere, v3.0'.", "Obu, J., Westermann, S., Barboux, C., Bartsch, A., Delaloye, R., Grosse, G., Heim, B., Hugelius,G., Irrgang, A., K\u00e4\u00e4b, A. M., Kroisleitner, C., Matthes, H., Nitze, I., Pellet, C., Seifert,F. M., Strozzi, T., Wegm\u00fcller, U., Wieczorek, M. & Wiesmann, A. (2021c), 'ESA Permafrost Climate Change Initiative (permafrost_cci): Permafrost ground temperature for the Northern Hemisphere, v3.0", "Wang, S., Ramage, J., Bartsch, A. & Efimova, A. (2021), 'Population in the arctic circumpolar permafrost region at settlement level', Zenodo. 10.5281/ZENODO.45296", "Martha K. Raynolds, Donald A. Walker, Andrew Balser, Christian Bay, Mitch Campbell, Mikhail M. Cherosov, Fred J.A. Dani\u00ebls, Pernille Bronken Eidesen, Ksenia A. Ermokhina, Gerald V. Frost, Birgit Jedrzejek, M. Torre Jorgenson, Blair E. Kennedy, Sergei S. Kholod, Igor A. Lavrinenko, Olga V. Lavrinenko, Borg\u00fe\u00f3r Magn\u00fasson, Nadezhda V. Matveyeva, Sigmar Met\u00fasalemsson, Lennart Nilsen, Ian Olthof, Igor N. Pospelov, Elena B. Pospelova, Darren Pouliot, Vladimir Razzhivin, Gabriela Schaepman-Strub, Jozef \u0160ib\u00edk, Mikhail Yu. Telyatnikov, Elena Troeva (2019): 'A raster version of the Circumpolar Arctic Vegetation Map (CAVM)', Remote Sensing of Environment, Volume 232, 111297.", "Nitze, I., Grosse, G., Jones, B. M., Romanovsky, V. E. & Boike, J. (2018), 'Remote sensing quantifies widespread abundance of permafrost region disturbances across the Arctic and Subarctic', Nature Communications 9(1).", "Bartsch et al. (2021), Expanding infrastructure and growing anthropogenic impacts along Arctic coasts, ERL\u00a0https://iopscience.iop.org/article/10.1088/1748-9326/ac3176/meta"]} The SACHI (Sentinel-1/2 derived Arctic Coastal Human Impact) dataset has been primarily developed as part of the HORIZON2020 project Nunataryuk by b.geos (www.bgeos.com). It covers a 100km buffer from the Arctic Coast (land area), for areas with permafrost near the coast. It is based on Sentinel-1 and Sentinel-2 data from 2016-2020 using the algorithms described in Bartsch et al. (2020). It is a supplement to Bartsch et al. (2021 - https://iopscience.iop.org/article/10.1088/1748-9326/ac3176/meta). It consists of three shape files: 1) SACHI.shp - all identified objects with infrastructure/impact classes and auxiliary information (permafrost status and trends, nightlight radiance, vegetation zone, Normalized Difference Vegetation Index trends from Landsat, settlements names) 2) SACHI_100km_buffer - Buffer polygon (analyses extent) 3) SACHI_granules_acquisition_dates - processed Sentinel-2 granule extent polygons with dates of all used input data SACHI class values: 1=linear transport infrastructure, 2=buildings (and other constructions such as bridges), 3=other impacted area (includes gravel pads, mining sites) See README.TXT for description of data fields. Further support was received by ESA CCI+ Permafrost, HGF AI-CORE, and NSF Permafrost DiscoveryGateway. The processing scheme was developed on a highly performant virtual machine (VM) provided by the Copernicus Research and User Support (RUS). Results are based on modified Copernicus data from 2016 to 2020.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: ZENODO
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2021
    Data sources: Datacite
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: ZENODO
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2021
      Data sources: Datacite
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Richter, Kristine Korzow; Maccarinelli, Angela; Harland, Jen; Bottomley, Zoe; +2 Authors

    Images from all 46 archaeological test bones associated with the archaeological test set MALDI-TOF data. MALDI-TOF data from both reference and test sets. Reference sets are labeled with their species identification. Each set consists of .tex files. Files in the same folder are technical replicates of the same extract.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2019
    Data sources: ZENODO
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2019
    Data sources: Datacite
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2019
      Data sources: ZENODO
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2019
      Data sources: Datacite
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Capet Arthur; Vandenbulcke Luc; Grégoire Marilaure;

    Data files provided in support of 'Global warming triggered a reduced and intermittent ventilation regime in the Black Sea', by Capet et al, 2018. Black_Sea_CIL_Cold_Content_Annual.nc contains the spatial and annual averages of the Black Sea cold intermediate layer cold content, as defined in the above reference, and derived from multiple in-situ and modelling sources, for the period (1955-2017). Black_Sea_CIL_Cold_Content_Weekly.nc contains the spatial and weekly averages of the Black Sea cold intermediate layer cold content, as defined in the above reference, and derived from the GHER3D model, for the period (1981-2017).

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ZENODO
    Dataset . 2018
    Data sources: ZENODO
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ZENODOarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      ZENODO
      Dataset . 2018
      Data sources: ZENODO
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Toohey, Matthew; Sigl, Michael;

    Project: Earth System Model Forcing and Verification - The project consolidates data entities which are suitable to force and/or to verify Earth system models. The archived data entities contain data and data products mainly from observations or reconstruction. The eVolv2k project is supported by the Deutsche Forschungsgemeinschaft (DFG) in the framework of the priority programme “Antarctic Research with comparative investigations in Arctic ice areas” through grant TO 967/1-1. Summary: The eVolv2k database includes estimates of the magnitudes and approximate source latitudes of major volcanic stratospheric sulphur injection (VSSI) events from 500 BCE to 1900 CE. The VSSI estimates incorporate recent improvements to the ice core records in terms of synchronization and dating, refinements to the methods used to estimate VSSI from ice core records, and includes first estimates of the random uncertainties in VSSI values. Ice core-derived volcanic sulfate deposition composites for Antarctica (Sigl et al., 2014) and Greenland (Sigl et al., 2015, Zielinski et al., 1995) are scaled to volcanic stratospheric sulfur injection based on a method similar to that of Gao et al. (2007). More details to be published in a forthcoming article (Toohey and Sigl, in prep). Compared to version 1, this version (1) contains estimates of the random error in the VSSI estimates, (2) includes a clarification regarding the format of years in the BCE period by including both years BCE/CE and according to the ISO 8601 standard (which includes a year 0), and (3) includes some minor modifications to the VSSI values. In addition, a reconstruction of stratospheric aerosol optical depth (AOD) using the VSSI estimates and the EVA v1 volcanic forcing generator (Toohey et al., 2016) is provided. Complete optical properties (extinction, single scattering albedo, scattering asymmetry factor) as a function of height, latitude and time can be produced using the eVolv2k VSSI database and the EVA forcing generator. Gao, C., Oman, L., Robock, A. and Stenchikov, G. L.: Atmospheric volcanic loading derived from bipolar ice cores: Accounting for the spatial distribution of volcanic deposition, J. Geophys. Res., 112(D9), doi:10.1029/2006JD007461, 2007. Sigl, M., Winstrup, M., McConnell, J. R., Welten, K. C., Plunkett, G., Ludlow, F., Büntgen, U., Caffee, M., Chellman, N., Dahl-Jensen, D., Fischer, H., Kipfstuhl, S., Kostick, C., Maselli, O. J., Mekhaldi, F., Mulvaney, R., Muscheler, R., Pasteris, D. R., Pilcher, J. R., Salzer, M., Schüpbach, S., Steffensen, J. P., Vinther, B. M. and Woodruff, T. E.: Timing and climate forcing of volcanic eruptions for the past 2,500 years, Nature, 523, 543¿549, doi:10.1038/nature14565, 2015. Sigl, M., McConnell, J. R., Toohey, M., Curran, M., Das, S. B., Edwards, R., Isaksson, E., Kawamura, K., Kipfstuhl, S., Krüger, K., Layman, L., Maselli, O. J., Motizuki, Y., Motoyama, H., Pasteris, D. R. and Severi, M.: Insights from Antarctica on volcanic forcing during the Common Era, Nat. Clim. Chang., 4, 693-697, doi:10.1038/nclimate2293, 2014. Toohey, M. and Sigl, M.: Volcanic stratospheric sulphur injections and aerosol optical depth from 500 BCE to 1900 CE, in preparation. Toohey, M., Stevens, B., Schmidt, H. and Timmreck, C.: Easy Volcanic Aerosol (EVA v1.0): an idealized forcing generator for climate simulations, Geosci. Model Dev., 9(11), 4049–4070, doi:10.5194/GMD-9-4049-2016, 2016. Zielinski, G. A.: Stratospheric loading and optical depth estimates of explosive volcanism over the last 2100 years derived from the Greenland Ice Sheet Project 2 ice core, J. Geophys. Res., 100(D10), 20937–20955, doi:10.1029/95JD01751, 1995.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao World Data Center fo...arrow_drop_down
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    World Data Center for Climate
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao World Data Center fo...arrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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    Authors: Pafilis, Evangelos; Pavlopoulos, Georgios; Satagopam, Venkata; Papanikolaou, Nikolas; +5 Authors

    Retrieving all of the necessary information from databases about bioentities mentioned in an article is not a trivial or an easy task. Following the daily literature about a specific biological topic and collecting all the necessary information about the bioentities mentioned in the literature manually is tedious and time consuming. OnTheFly 2.0 is a web application mainly designed for non-computer experts which aims to automate data collection and knowledge extraction from biological literature in a user friendly and efficient way. OnTheFly 2.0 is able to extract bioentities from individual articles such as text, Microsoft Word, Excel and PDF files. With a simple drag-and-drop motion, the text of a document is extensively parsed for bioentities such as protein/gene names and chemical compound names. Utilizing high quality data integration platforms, OnTheFly allows the generation of informative summaries, interaction networks and at-a-glance popup windows containing knowledge related to the bioentities found in documents. OnTheFly 2.0 provides a concise application to automate the extraction of bioentities hidden in various documents and is offered as a web based application.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Open Repository and ...arrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: Martinelli M.; Moroni D.; Salvetti O.;

    Based on the idea that contribution of volunteers might play a fundamental role in monitoring and protecting the environment, CNR-ISTI designed and developed a mobile application in order to allow people to timely report oil spills. By downloading the FREE app "ARGO Sentinel" volunteers are helping to monitor the health of our seas and the scientific research by demonstrating that the use of this new technology could be really important to combat pollution. Moreover this experiment suggests that this kind of technology can be applied in many other fields. Whoever at sea sights pollution by oil or hydrocarbons is now able to immediately report the event to the Laboratory of Signals and Images SI-LAB (si.isti.cnr.it) of the Institute of Science and Information Technologies of the Italian National Research Council (CNR-ISTI) in Pisa, allowing the realization of a detailed map of the health of our seas. This information is recorded in the Marine Information System (MIS) produced by CNR, able to collect geotagged data relating to critical and health issues of the sea from various sources (satellites, optical sensors, electronic noses, autonomous underwater vehicles systems) and integrate and generate predictive models to assist the authorities in the management of emergencies at sea. The application, distributed in Italian, English and Greek languages, for smartphones equipped of GPS is an easy to use tool designed for anyone, that for any reason, sail the seas. It allows you to send reports of suspected spills to the CNR specifying the precise point, severity and a description of the spill.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ISTI Open Portalarrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    ISTI Open Portal
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    CNR ExploRA
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao ISTI Open Portalarrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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