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Research data keyboard_double_arrow_right Dataset 2023 EnglishZenodo Authors: Anonumous;Anonumous;We collected specimens of Ulva sp. (green algae), Saccharina sp. (brown algae), Grateloupia sp., and Gelidium sp. (both red algae) during all four seasons from a coastal reef in Weihai, China, and analyzed their surface-colonizing bacteria in comparison to surrounding seawater and sediment controls. 16S rRNA amplicon sequencing, extensive plate cultivation, sequencing of selected strains, and sequencing of 23 metagenomes were performed in this study. Besides composition, we analyzed the potential of phycosphere bacteria to degrade algal polysaccharides and to produce bioactive secondary metabolites. This comprehensive dataset represents a significant stepping stone towards a better understanding of macroalgal phycosphere bacteria and paves the way to functional studies on representative strains.
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visibility 49visibility views 49 download downloads 2 Powered bymore_vert ZENODO arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8185152&type=result"></script>'); --> </script>
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.euResearch data keyboard_double_arrow_right Dataset 2023Zenodo Authors: Turner, Thomas; Lonhart, Steve;Turner, Thomas; Lonhart, Steve;California's network of marine protected areas was created to protect the diversity and abundance of native marine life, but the status of some taxa is very poorly known. Here we describe the sponges (phylum Porifera) from the Carmel Pinnacles State Marine Reserve, as assessed by a SCUBA-based survey in shallow waters. Of the 29 sponge species documented, 12 (41%) of them were previously unknown. Using a combination of underwater photography, DNA sequencing, and morphological taxonomy, we greatly improve our understanding of the status and distribution of previously described species and formerly describe the new species as Hymedesmia promina, Phorbas nebulosus, Clathria unoriginalis, Clathria rumsena, Megaciella sanctuaria, Mycale lobos, Xestospongia ursa, Haliclona melissae, Halichondria loma, Hymeniacidon fusiformis, Scopalina carmela, and Obruta collector. An additional species, Lissodendoryx topsenti (de Laubenfels 1930), is moved to Hemimycale, and H. polyboletus is created as a nomen novum due to preoccupation by H. topsenti (Burton 1929). Several of the new species appear to be rare and/or have very restricted distributions, as they were not found at comparative survey sites outside of Carmel Bay. These results illustrate the potential of qualitative presence/absence systematic surveys of understudied taxa to discover and document substantial novel diversity.
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Simonis, Juniper L.;Simonis, Juniper L.;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.eu0 citations 0 popularity Average influence Average impulse Average Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.euResearch data keyboard_double_arrow_right Image 2023 EnglishZenodo Authors: Carreras, Joaquim;Carreras, Joaquim;BCL6 IGH rearrangement FISH images and cases (excel)
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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Research data keyboard_double_arrow_right Dataset 2023 EnglishZenodo Authors: Anonumous;Anonumous;We collected specimens of Ulva sp. (green algae), Saccharina sp. (brown algae), Grateloupia sp., and Gelidium sp. (both red algae) during all four seasons from a coastal reef in Weihai, China, and analyzed their surface-colonizing bacteria in comparison to surrounding seawater and sediment controls. 16S rRNA amplicon sequencing, extensive plate cultivation, sequencing of selected strains, and sequencing of 23 metagenomes were performed in this study. Besides composition, we analyzed the potential of phycosphere bacteria to degrade algal polysaccharides and to produce bioactive secondary metabolites. This comprehensive dataset represents a significant stepping stone towards a better understanding of macroalgal phycosphere bacteria and paves the way to functional studies on representative strains.
ZENODO arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
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visibility 49visibility views 49 download downloads 2 Powered bymore_vert ZENODO arrow_drop_down add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
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You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8185152&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8180680&type=result"></script>'); --> </script>
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You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8180680&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euResearch data keyboard_double_arrow_right Dataset 2023Zenodo Authors: Turner, Thomas; Lonhart, Steve;Turner, Thomas; Lonhart, Steve;California's network of marine protected areas was created to protect the diversity and abundance of native marine life, but the status of some taxa is very poorly known. Here we describe the sponges (phylum Porifera) from the Carmel Pinnacles State Marine Reserve, as assessed by a SCUBA-based survey in shallow waters. Of the 29 sponge species documented, 12 (41%) of them were previously unknown. Using a combination of underwater photography, DNA sequencing, and morphological taxonomy, we greatly improve our understanding of the status and distribution of previously described species and formerly describe the new species as Hymedesmia promina, Phorbas nebulosus, Clathria unoriginalis, Clathria rumsena, Megaciella sanctuaria, Mycale lobos, Xestospongia ursa, Haliclona melissae, Halichondria loma, Hymeniacidon fusiformis, Scopalina carmela, and Obruta collector. An additional species, Lissodendoryx topsenti (de Laubenfels 1930), is moved to Hemimycale, and H. polyboletus is created as a nomen novum due to preoccupation by H. topsenti (Burton 1929). Several of the new species appear to be rare and/or have very restricted distributions, as they were not found at comparative survey sites outside of Carmel Bay. These results illustrate the potential of qualitative presence/absence systematic surveys of understudied taxa to discover and document substantial novel diversity.
All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=od______2659::edca010f29c212b39363d42a5b7ae2cb&type=result"></script>'); --> </script>
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For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Simonis, Juniper L.;Simonis, Juniper L.;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.eu0 citations 0 popularity Average influence Average impulse Average Powered by BIP!
more_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.3628045&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
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For further information contact us at helpdesk@openaire.eumore_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
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You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8176281&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8170316&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eumore_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8170316&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euintegration_instructions Research softwarekeyboard_double_arrow_right Software 2023Zenodo Authors: Juniper L. Simonis;Juniper L. Simonis;Tools for interacting with the publicly available California Delta Fish Salvage Database, including continuous deployment of data access, analysis, and presentation.
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8166153&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.eumore_vert add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down <script type="text/javascript"> <!-- document.write('<div id="oa_widget"></div>'); document.write('<script type="text/javascript" src="https://www.openaire.eu/index.php?option=com_openaire&view=widget&format=raw&projectId=10.5281/zenodo.8166153&type=result"></script>'); --> </script>
For further information contact us at helpdesk@openaire.euResearch data keyboard_double_arrow_right Image 2023 EnglishZenodo Authors: Carreras, Joaquim;Carreras, Joaquim;BCL6 IGH rearrangement FISH images and cases (excel)
add ClaimPlease grant OpenAIRE to access and update your ORCID works.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.This Research product is the result of merged Research products in OpenAIRE.
You have already added works in your ORCID record related to the merged Research product.All Research productsarrow_drop_down