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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Weihong, Qi; Maria Chiara, Cascarano; Ralph, Schlapbach; Pantelis, Katharios; +2 Authors

    Endozoicomonas bacteria are generally beneficial symbionts of diverse marine invertebrates including reef-building corals, sponges, sea squirts, sea slugs, molluscs, and Bryozoans. In contrast, the recently reported Ca. Endozoicomonas cretensis was identified as a vertebrate pathogen, causing epitheliocystis in fish larvae resulting in massive mortality. Here, we described the Ca. E. cretensis draft genome, currently undergoing genome decay as evidenced by massive insertion sequence (IS element) expansion and pseudogene formation. Many of the insertion sequences are also predicted to carry outward-directed promoters, implying that they may be able to modulate the expression of neighbouring coding sequences (CDSs). Comparative genomic analysis has revealed many Ca. E. cretensis-specific CDSs, phage integration and novel gene families. Potential virulence related CDSs and machineries were identified in the genome, including secretion systems and related effector proteins, and systems related to biofilm formation and directed cell movement. Mucin degradation would be of importance to a fish pathogen, and many candidate CDSs associated with this pathway have been identified. The genome may reflect a bacterium in the process of changing niche from symbiont to pathogen, through expansion of virulence genes and some loss of metabolic capacity. Genome Biology and Evolution, 10 (6) ISSN:1759-6653

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Europe PubMed Centra...arrow_drop_down
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Genome Biology and Evolution
    Article . 2018 . Peer-reviewed
    License: CC BY NC
    Data sources: Crossref
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Zurich Open Repository and Archive
    Other literature type . Article . 2018
    License: CC BY NC
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Research Collection
    Article . 2018
    License: CC BY NC
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Genome Biology and Evolution
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    ETH Zürich Research Collection
    Article . 2018
    License: CC BY NC
    Data sources: Datacite
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Europe PubMed Centra...arrow_drop_down
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Genome Biology and Evolution
      Article . 2018 . Peer-reviewed
      License: CC BY NC
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Zurich Open Repository and Archive
      Other literature type . Article . 2018
      License: CC BY NC
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      Research Collection
      Article . 2018
      License: CC BY NC
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Genome Biology and Evolution
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      ETH Zürich Research Collection
      Article . 2018
      License: CC BY NC
      Data sources: Datacite
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: V, Paraskevopoulou; C, Zeri; H, Kaberi; O, Chalkiadaki; +3 Authors

    Abstract The aim of this work is to assess trace metal pollution status (Cd, Cu, Ni, Pb, Zn) in the waters of Saronikos Gulf, Greece, in line with the WFD and MSFD European Directives, based on data collected over a decade (2000–2010). Dissolved metal background levels are estimated for the first time for Greek marine waters and the upper limits are: Cd: 0.574 nmol L−1; Cu: 8.26 nmol L−1; Ni: 7.94 nmol L−1; Pb: 2.60 nmol L−1; Zn: 115 nmol L−1. The variability of dissolved and particulate metals reflected the presence of several point sources and revealed the importance of natural mechanisms acting as non-point sources. The status of Saronikos Gulf is classified as ‘High’ for most metals studied. An exception to this is the enclosed Elefsis Bay where Cu, Ni and Zn concentrations are found above background. Our work will assist the implementation of WFD and MSFD directives in Greece.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Marine Pollution Bul...arrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Marine Pollution Bulletin
    Article . 2014 . Peer-reviewed
    License: Elsevier TDM
    Data sources: Crossref
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Marine Pollution Bul...arrow_drop_down
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Marine Pollution Bulletin
      Article . 2014 . Peer-reviewed
      License: Elsevier TDM
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Jorge Alvarez-Solas; Rubén Banderas; Alexander Robinson; Marisa Montoya;

    Abstract. The last glacial period (LGP; ca. 110–10 kyr BP) was marked by the existence of two types of abrupt climatic changes, Dansgaard–Oeschger (DO) and Heinrich (H) events. Although the mechanisms behind these are not fully understood, it is generally accepted that the presence of ice sheets played an important role in their occurrence. While an important effort has been made to investigate the dynamics and evolution of the Laurentide ice sheet (LIS) during this period, the Eurasian ice sheet (EIS) has not received much attention, in particular from a modeling perspective. However, meltwater discharge from this and other ice sheets surrounding the Nordic seas is often implied as a potential cause of ocean instabilities that lead to glacial abrupt climate changes. Thus, a better comprehension of the evolution of the EIS during the LGP is important to understand its role in glacial abrupt climate changes. Here we investigate the response of the EIS to millennial-scale climate variability during the LGP. We use a hybrid, three-dimensional, thermomechanical ice-sheet model that includes ice shelves and ice streams. The model is forced off-line via a novel perturbative approach that, as opposed to conventional methods, clearly differentiates between the spatial patterns of millennial-scale and orbital-scale climate variability. Thus, it provides a more realistic treatment of the forcing at millennial timescales. The effect of both atmospheric and oceanic variations are included. Our results show that the EIS responds with enhanced ice discharge in phase with interstadial warming in the North Atlantic when forced with surface ocean temperatures. Conversely, when subsurface ocean temperatures are used, enhanced ice discharge occurs both during stadials and at the beginning of the interstadials. Separating the atmospheric and oceanic effects demonstrates the major role of the ocean in controlling the dynamics of the EIS on millennial timescales. While the atmospheric forcing alone is only able to produce modest iceberg discharges, warming of the ocean leads to higher rates of iceberg discharges as a result of relatively strong basal melting at the margins of the ice sheet. Our results clearly show the capability of the EIS to react to glacial abrupt climate changes, and highlight the need for stronger constraints on the ice sheet's glacial dynamics and climate–ocean interactions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ E-Prints Complutensearrow_drop_down
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    Climate of the Past
    Article . 2019
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    Climate of the Past (CP)
    Article . 2019 . Peer-reviewed
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    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    DOAJ
    Article . 2019
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    Climate of the Past (CP)
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    Copernicus Publications
    Other literature type . 2019
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ E-Prints Complutensearrow_drop_down
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Climate of the Past
      Article . 2019
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      Climate of the Past (CP)
      Article . 2019 . Peer-reviewed
      License: CC BY
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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      Article . 2019
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      Climate of the Past (CP)
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      Other literature type . 2019
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    Authors: Eleni Mente; Chris G. Carter; R Barnes; Nikolaos Vlahos; +1 Authors

    Simple Summary Using combinations of plant protein concentrates and EAA supplementation, high levels of replacement (50–75% of fishmeal protein) have been achieved in gilthead sea bream without affecting the growth performance or quality traits. It was confirmed in this study that 16% replacement of marine protein with plant protein meets the amino acid needs of sea bream. The results of the present study suggest the need to further investigate tissue-specific and species-specific responses in the timing and ability to regulate metabolism due to dietary nutrient utilization. Abstract Following a meal, a series of physiological changes occurs in fish as they digest, absorb and assimilate ingested nutrients. This study aims to assess post-prandial free amino acid (FAA) activity in gilthead sea bream consuming a partial marine protein (fishmeal) replacement. Sea bream were fed diets where 16 and 27% of the fishmeal protein was replaced by plant protein. The essential amino acid (EAA) composition of the white muscle, liver and gut of sea bream was strongly correlated with the EAA composition of the 16% protein replacement diet compared to the 27% protein replacement diet. The mean FAA concentration in the white muscle and liver changed at 4 to 8 h after a meal and was not different to pre-feeding (0 h) and at 24 h after feeding. It was confirmed in this study that 16% replacement of marine protein with plant protein meets the amino acid needs of sea bream. Overall, the present study contributes towards understanding post-prandial amino acid profiles during uptake, tissue assimilation and immediate metabolic processing of amino acids in sea bream consuming a partial marine protein replacement. This study suggests the need to further investigate the magnitude of the post-prandial tissue-specific amino acid activity in relation to species-specific abilities to regulate metabolism due to dietary nutrient utilization.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Europe PubMed Centra...arrow_drop_down
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    Animals
    Other literature type . Article . 2021 . Peer-reviewed
    License: CC BY
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    Animals
    Article . 2021
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    DOAJ
    Article . 2021
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    Animals
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      Animals
      Other literature type . Article . 2021 . Peer-reviewed
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    Authors: Taliadourou, D.; Papadopoulos V; Domvridou, E.; Savvaidis, I. N.; +1 Authors

    The effect of filleting on the microbiological, chemical and sensory properties of aquacultured sea bass (Dicentrarchus labrax) stored in ice was studied. Pseudomonads, H(2)S-producing bacteria (including Shewanella putrefaciens) and Brochothrix thermosphacta were the dominant bacteria at the end of the 16 day storage period in ice for both whole ungutted and filleted sea bass. Enterobacteriaceae were also found in the spoilage microflora of whole ungutted and filleted sea bass, but their counts were always lower than those of pseudomonads, H(2)S-producing bacteria (including S putrefaciens) and B thermosphacta. Total viable counts for whole ungutted sea bass were always lower than those for filleted sea bass samples. Of the chemical indicators of spoilage, TMA (trimethylamine) values of whole ungutted sea bass increased very slowly, whereas significantly higher values were obtained for filleted samples, with respective values of 0.253 and 1.515 mg N per 100 g muscle being reached at the end of their shelf-life (days 13 and 9 respectively). TVB-N (total volatile basic nitrogen) values showed a slight increase for whole ungutted sea bass during storage, reaching a value of 26.77 mg N per 100 g muscle (day 13), whereas for filleted fish a corresponding value of 26.88 mg N per 100 g muscle was recorded (day 9). TBA (thiobarbituric acid) values increased slowly for whole ungutted and filleted sea bass samples throughout the entire storage period, reaching final values of 4.48 (day 13) and 13.84 (day 9) mg malonaldehyde kg(-1) respectively. Sensory assessment of raw fish using the EC freshness scale gave a grade E for up to 5 days for whole ungutted sea bass, a grade A for a further 4 days and a grade B for an additional 4 days, after which sea bass was graded as C (unfit). Overall acceptability scores for odour, taste and texture of cooked whole ungutted and filleted sea bass decreased with increasing time of storage. The results of this study indicate that the shelf-fife of sea bass stored in ice, as determined by overall acceptability sensory scores and microbiological data, is 8-9 days for filleted and 12-13 days for whole ungutted fish. (C) 2003 Society of Chemical Industry. Journal of the Science of Food and Agriculture

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    Authors: Atta, Khan Rashid;

    - -

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    Authors: Asmi; A.; Wiedensohler; A.; +68 Authors

    Two years of harmonized aerosol number size distribution data from 24 European field monitoring sites have been analysed. The results give a comprehensive overview of the European near surface aerosol particle number concentrations and number size distributions between 30 and 500 nm of dry particle diameter. Spatial and temporal distribution of aerosols in the particle sizes most important for climate applications are presented. We also analyse the annual, weekly and diurnal cycles of the aerosol number concentrations, provide log-normal fitting parameters for median number size distributions, and give guidance notes for data users. Emphasis is placed on the usability of results within the aerosol modelling community. International audience

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    https://doi.org/10.5194/acpd-1...
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    Atmospheric Chemistry and Physics (ACP)
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    Atmospheric Chemistry and Physics (ACP)
    Article . 2011 . Peer-reviewed
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    Copernicus Publications
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      https://doi.org/10.5194/acpd-1...
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      Atmospheric Chemistry and Physics (ACP)
      Article . 2011 . Peer-reviewed
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    Authors: Horneck, G.; Walter, N.; Westall, F.; Grenfell, J.L.; +16 Authors

    Table of Contents 1. Introduction 1.1. The project AstRoMap within the Framework Programme for Research and Innovation (FP7) of the European Union 1.2. The European astrobiology environment and landscape in Europe 1.3. Setting the scene: timeline and astrobiology concepts 2. The Astrobiology Roadmap for Europe 3. Research Topic 1: Origin and Evolution of Planetary Systems 3.1. State of the art 3.2. Key objectives 3.3. Approach to achieve the key objectives 3.4. European strengths and needs 4. Research Topic 2: Origins of Organic Compounds in Space 4.1. State of the art 4.2. Key objectives 4.3. Approach to achieve the key objectives 4.4. European strengths and needs 5. Research Topic 3: Rock-Water-Carbon Interactions, Organic Synthesis on Earth, and Steps to Life 5.1. State of the art 5.2. Key objectives 5.3. Approach to achieve the key objectives 5.4. European strengths and needs 6. Research Topic 4: Life and Habitability 6.1. State of the art 6.2. Key objectives 6.3. Approach to achieve the key objectives 6.4. European strengths and needs 7. Research Topic 5: Biosignatures as Facilitating Life Detection 7.1. State of the art 7.2. Key objectives 7.3. Approach to achieve the key objectives 7.4. European strengths and needs 8. Conclusions and Recommendations 8.1. Cross-cutting issues of relevance 8.2. Towards a better coordination of astrobiology research in Europe—the need for a pan-European platform Acknowledgments References Abbreviations Used Abstract The European AstRoMap project (supported by the European Commission Seventh Framework Programme) surveyed the state of the art of astrobiology in Europe and beyond and produced the first European roadmap for astrobiology research. In the context of this roadmap, astrobiology is understood as the study of the origin, evolution, and distribution of life in the context of cosmic evolution; this includes habitability in the Solar System and beyond. The AstRoMap Roadmap identifies five research topics, specifies several key scientific objectives for each topic, and suggests ways to achieve all the objectives. The five AstRoMap Research Topics are • Research Topic 1: Origin and Evolution of Planetary Systems• Research Topic 2: Origins of Organic Compounds in Space• Research Topic 3: Rock-Water-Carbon Interactions, Organic Synthesis on Earth, and Steps to Life• Research Topic 4: Life and Habitability• Research Topic 5: Biosignatures as Facilitating Life Detection It is strongly recommended that steps be taken towards the definition and implementation of a European Astrobiology Platform (or Institute) to streamline and optimize the scientific return by using a coordinated infrastructure and funding system. Key Words: Astrobiology roadmap—Europe—Origin and evolution of life—Habitability—Life detection—Life in extreme environments. Astrobiology 16, 201–243.

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    Astrobiology
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    Authors: Evgenia Mitsou; Vasiliki Pletsa; George T. Sotiroudis; Pierre Panine; +2 Authors

    Abstract A novel water-in-oil (W/O) microemulsion based on natural oils, namely extra virgin olive oil (EVOO) and sunflower oil (SO), in the presence of non-ionic surfactants was successfully formulated. The novel microemulsion was used as a carrier for gallic acid (GA) to assure its protection and efficacy upon nasal administration. The work presents evidence that this microemulsion can be used as a nasal formulation for the delivery of polar antioxidants, especially, after incorporation of chitosan (CH) in its aqueous phase. The structure of the system was studied by Small Angle X-ray Scattering (SAXS), Dynamic Light Scattering (DLS) and Electron Paramagnetic Resonance (EPR) spectroscopy techniques. By the addition of CH, the diameter of the microemulsion remained unaltered at 47 nm whereas after the incorporation of GA, micelles with 51 nm diameter were detected. The dynamic properties of the surfactant monolayer were affected by both the incorporation of CH and GA. Moreover, the antioxidant activity of the latter remained unaltered (99 %). RPMI 2650 cell line was used as the in vitro model for cell viability and for GA nasal epithelial transport studies after microemulsion administration. The results suggested that the nasal epithelial permeation of GA was enhanced, 3 h post administration, by the presence of 0.2 % v/v microemulsion in the culture medium. However, the concentration of the transported antioxidant in the presence of CH was higher indicating the polymer’s effect on the transport of the GA. The study revealed that nasal administration of hydrophilic antioxidants could be used as an alternative route besides oral administration.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Colloids and Surface...arrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Colloids and Surfaces B Biointerfaces
    Article . 2020 . Peer-reviewed
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      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Colloids and Surfaces B Biointerfaces
      Article . 2020 . Peer-reviewed
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  • Authors: Dionysios E. Raitsos; Samantha Lavender; Christos D. Maravelias; John Haralabous; +3 Authors

    Diatoms exist in almost every aquatic regime; they are responsible for ∼20% of global carbon fixation and ∼25% of global primary production, and are regarded as a key food for copepods, which are subsequently consumed by larger predators such as fish and marine mammals. A decreasing abundance and a vulnerability to climatic change in the North Atlantic Ocean have been reported in the literature. In the present work, a data matrix composed of concurrent satellite remote sensing and Continuous Plankton Recorder (CPR) in situ measurements was collated for the same spatial and temporal coverage in the Northeast Atlantic. Artificial neural networks (ANNs) were applied to recognize and learn the complex non-monotonic and non-linear relationships between diatom abundance and spatiotemporal environmental factors. Because of their ability to mimic non-linear systems, ANNs proved far more effective in modelling the diatom distribution in the marine ecosystem. The results of this study reveal that diatoms have a regular seasonal cycle, with their abundance most strongly influenced by sea surface temperature (SST) and light intensity. The models indicate that extreme positive SSTs decrease diatom abundances regardless of other climatic conditions. These results provide information on the ecology of diatoms that may advance our understanding of the potential response of diatoms to climatic change.

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    Authors: Weihong, Qi; Maria Chiara, Cascarano; Ralph, Schlapbach; Pantelis, Katharios; +2 Authors

    Endozoicomonas bacteria are generally beneficial symbionts of diverse marine invertebrates including reef-building corals, sponges, sea squirts, sea slugs, molluscs, and Bryozoans. In contrast, the recently reported Ca. Endozoicomonas cretensis was identified as a vertebrate pathogen, causing epitheliocystis in fish larvae resulting in massive mortality. Here, we described the Ca. E. cretensis draft genome, currently undergoing genome decay as evidenced by massive insertion sequence (IS element) expansion and pseudogene formation. Many of the insertion sequences are also predicted to carry outward-directed promoters, implying that they may be able to modulate the expression of neighbouring coding sequences (CDSs). Comparative genomic analysis has revealed many Ca. E. cretensis-specific CDSs, phage integration and novel gene families. Potential virulence related CDSs and machineries were identified in the genome, including secretion systems and related effector proteins, and systems related to biofilm formation and directed cell movement. Mucin degradation would be of importance to a fish pathogen, and many candidate CDSs associated with this pathway have been identified. The genome may reflect a bacterium in the process of changing niche from symbiont to pathogen, through expansion of virulence genes and some loss of metabolic capacity. Genome Biology and Evolution, 10 (6) ISSN:1759-6653

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    Genome Biology and Evolution
    Article . 2018 . Peer-reviewed
    License: CC BY NC
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    Zurich Open Repository and Archive
    Other literature type . Article . 2018
    License: CC BY NC
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    Research Collection
    Article . 2018
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    Genome Biology and Evolution
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    ETH Zürich Research Collection
    Article . 2018
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      Genome Biology and Evolution
      Article . 2018 . Peer-reviewed
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      Other literature type . Article . 2018
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      ETH Zürich Research Collection
      Article . 2018
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  • image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Authors: V, Paraskevopoulou; C, Zeri; H, Kaberi; O, Chalkiadaki; +3 Authors

    Abstract The aim of this work is to assess trace metal pollution status (Cd, Cu, Ni, Pb, Zn) in the waters of Saronikos Gulf, Greece, in line with the WFD and MSFD European Directives, based on data collected over a decade (2000–2010). Dissolved metal background levels are estimated for the first time for Greek marine waters and the upper limits are: Cd: 0.574 nmol L−1; Cu: 8.26 nmol L−1; Ni: 7.94 nmol L−1; Pb: 2.60 nmol L−1; Zn: 115 nmol L−1. The variability of dissolved and particulate metals reflected the presence of several point sources and revealed the importance of natural mechanisms acting as non-point sources. The status of Saronikos Gulf is classified as ‘High’ for most metals studied. An exception to this is the enclosed Elefsis Bay where Cu, Ni and Zn concentrations are found above background. Our work will assist the implementation of WFD and MSFD directives in Greece.

    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Marine Pollution Bul...arrow_drop_down
    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Marine Pollution Bulletin
    Article . 2014 . Peer-reviewed
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      Marine Pollution Bulletin
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    Authors: Jorge Alvarez-Solas; Rubén Banderas; Alexander Robinson; Marisa Montoya;

    Abstract. The last glacial period (LGP; ca. 110–10 kyr BP) was marked by the existence of two types of abrupt climatic changes, Dansgaard–Oeschger (DO) and Heinrich (H) events. Although the mechanisms behind these are not fully understood, it is generally accepted that the presence of ice sheets played an important role in their occurrence. While an important effort has been made to investigate the dynamics and evolution of the Laurentide ice sheet (LIS) during this period, the Eurasian ice sheet (EIS) has not received much attention, in particular from a modeling perspective. However, meltwater discharge from this and other ice sheets surrounding the Nordic seas is often implied as a potential cause of ocean instabilities that lead to glacial abrupt climate changes. Thus, a better comprehension of the evolution of the EIS during the LGP is important to understand its role in glacial abrupt climate changes. Here we investigate the response of the EIS to millennial-scale climate variability during the LGP. We use a hybrid, three-dimensional, thermomechanical ice-sheet model that includes ice shelves and ice streams. The model is forced off-line via a novel perturbative approach that, as opposed to conventional methods, clearly differentiates between the spatial patterns of millennial-scale and orbital-scale climate variability. Thus, it provides a more realistic treatment of the forcing at millennial timescales. The effect of both atmospheric and oceanic variations are included. Our results show that the EIS responds with enhanced ice discharge in phase with interstadial warming in the North Atlantic when forced with surface ocean temperatures. Conversely, when subsurface ocean temperatures are used, enhanced ice discharge occurs both during stadials and at the beginning of the interstadials. Separating the atmospheric and oceanic effects demonstrates the major role of the ocean in controlling the dynamics of the EIS on millennial timescales. While the atmospheric forcing alone is only able to produce modest iceberg discharges, warming of the ocean leads to higher rates of iceberg discharges as a result of relatively strong basal melting at the margins of the ice sheet. Our results clearly show the capability of the EIS to react to glacial abrupt climate changes, and highlight the need for stronger constraints on the ice sheet's glacial dynamics and climate–ocean interactions.

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    Climate of the Past
    Article . 2019
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    Climate of the Past (CP)
    Article . 2019 . Peer-reviewed
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    Climate of the Past (CP)
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      Climate of the Past (CP)
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    Authors: Eleni Mente; Chris G. Carter; R Barnes; Nikolaos Vlahos; +1 Authors

    Simple Summary Using combinations of plant protein concentrates and EAA supplementation, high levels of replacement (50–75% of fishmeal protein) have been achieved in gilthead sea bream without affecting the growth performance or quality traits. It was confirmed in this study that 16% replacement of marine protein with plant protein meets the amino acid needs of sea bream. The results of the present study suggest the need to further investigate tissue-specific and species-specific responses in the timing and ability to regulate metabolism due to dietary nutrient utilization. Abstract Following a meal, a series of physiological changes occurs in fish as they digest, absorb and assimilate ingested nutrients. This study aims to assess post-prandial free amino acid (FAA) activity in gilthead sea bream consuming a partial marine protein (fishmeal) replacement. Sea bream were fed diets where 16 and 27% of the fishmeal protein was replaced by plant protein. The essential amino acid (EAA) composition of the white muscle, liver and gut of sea bream was strongly correlated with the EAA composition of the 16% protein replacement diet compared to the 27% protein replacement diet. The mean FAA concentration in the white muscle and liver changed at 4 to 8 h after a meal and was not different to pre-feeding (0 h) and at 24 h after feeding. It was confirmed in this study that 16% replacement of marine protein with plant protein meets the amino acid needs of sea bream. Overall, the present study contributes towards understanding post-prandial amino acid profiles during uptake, tissue assimilation and immediate metabolic processing of amino acids in sea bream consuming a partial marine protein replacement. This study suggests the need to further investigate the magnitude of the post-prandial tissue-specific amino acid activity in relation to species-specific abilities to regulate metabolism due to dietary nutrient utilization.

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    Animals
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    Animals
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    Authors: Taliadourou, D.; Papadopoulos V; Domvridou, E.; Savvaidis, I. N.; +1 Authors

    The effect of filleting on the microbiological, chemical and sensory properties of aquacultured sea bass (Dicentrarchus labrax) stored in ice was studied. Pseudomonads, H(2)S-producing bacteria (including Shewanella putrefaciens) and Brochothrix thermosphacta were the dominant bacteria at the end of the 16 day storage period in ice for both whole ungutted and filleted sea bass. Enterobacteriaceae were also found in the spoilage microflora of whole ungutted and filleted sea bass, but their counts were always lower than those of pseudomonads, H(2)S-producing bacteria (including S putrefaciens) and B thermosphacta. Total viable counts for whole ungutted sea bass were always lower than those for filleted sea bass samples. Of the chemical indicators of spoilage, TMA (trimethylamine) values of whole ungutted sea bass increased very slowly, whereas significantly higher values were obtained for filleted samples, with respective values of 0.253 and 1.515 mg N per 100 g muscle being reached at the end of their shelf-life (days 13 and 9 respectively). TVB-N (total volatile basic nitrogen) values showed a slight increase for whole ungutted sea bass during storage, reaching a value of 26.77 mg N per 100 g muscle (day 13), whereas for filleted fish a corresponding value of 26.88 mg N per 100 g muscle was recorded (day 9). TBA (thiobarbituric acid) values increased slowly for whole ungutted and filleted sea bass samples throughout the entire storage period, reaching final values of 4.48 (day 13) and 13.84 (day 9) mg malonaldehyde kg(-1) respectively. Sensory assessment of raw fish using the EC freshness scale gave a grade E for up to 5 days for whole ungutted sea bass, a grade A for a further 4 days and a grade B for an additional 4 days, after which sea bass was graded as C (unfit). Overall acceptability scores for odour, taste and texture of cooked whole ungutted and filleted sea bass decreased with increasing time of storage. The results of this study indicate that the shelf-fife of sea bass stored in ice, as determined by overall acceptability sensory scores and microbiological data, is 8-9 days for filleted and 12-13 days for whole ungutted fish. (C) 2003 Society of Chemical Industry. Journal of the Science of Food and Agriculture

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    Article . 2003
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    Authors: Atta, Khan Rashid;

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    Authors: Asmi; A.; Wiedensohler; A.; +68 Authors

    Two years of harmonized aerosol number size distribution data from 24 European field monitoring sites have been analysed. The results give a comprehensive overview of the European near surface aerosol particle number concentrations and number size distributions between 30 and 500 nm of dry particle diameter. Spatial and temporal distribution of aerosols in the particle sizes most important for climate applications are presented. We also analyse the annual, weekly and diurnal cycles of the aerosol number concentrations, provide log-normal fitting parameters for median number size distributions, and give guidance notes for data users. Emphasis is placed on the usability of results within the aerosol modelling community. International audience

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    https://doi.org/10.5194/acpd-1...
    Preprint . 2011
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    Atmospheric Chemistry and Physics (ACP)
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    Atmospheric Chemistry and Physics (ACP)
    Article . 2011 . Peer-reviewed
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    Copernicus Publications
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      https://doi.org/10.5194/acpd-1...
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      Atmospheric Chemistry and Physics (ACP)
      Article . 2011 . Peer-reviewed
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    Authors: Horneck, G.; Walter, N.; Westall, F.; Grenfell, J.L.; +16 Authors

    Table of Contents 1. Introduction 1.1. The project AstRoMap within the Framework Programme for Research and Innovation (FP7) of the European Union 1.2. The European astrobiology environment and landscape in Europe 1.3. Setting the scene: timeline and astrobiology concepts 2. The Astrobiology Roadmap for Europe 3. Research Topic 1: Origin and Evolution of Planetary Systems 3.1. State of the art 3.2. Key objectives 3.3. Approach to achieve the key objectives 3.4. European strengths and needs 4. Research Topic 2: Origins of Organic Compounds in Space 4.1. State of the art 4.2. Key objectives 4.3. Approach to achieve the key objectives 4.4. European strengths and needs 5. Research Topic 3: Rock-Water-Carbon Interactions, Organic Synthesis on Earth, and Steps to Life 5.1. State of the art 5.2. Key objectives 5.3. Approach to achieve the key objectives 5.4. European strengths and needs 6. Research Topic 4: Life and Habitability 6.1. State of the art 6.2. Key objectives 6.3. Approach to achieve the key objectives 6.4. European strengths and needs 7. Research Topic 5: Biosignatures as Facilitating Life Detection 7.1. State of the art 7.2. Key objectives 7.3. Approach to achieve the key objectives 7.4. European strengths and needs 8. Conclusions and Recommendations 8.1. Cross-cutting issues of relevance 8.2. Towards a better coordination of astrobiology research in Europe—the need for a pan-European platform Acknowledgments References Abbreviations Used Abstract The European AstRoMap project (supported by the European Commission Seventh Framework Programme) surveyed the state of the art of astrobiology in Europe and beyond and produced the first European roadmap for astrobiology research. In the context of this roadmap, astrobiology is understood as the study of the origin, evolution, and distribution of life in the context of cosmic evolution; this includes habitability in the Solar System and beyond. The AstRoMap Roadmap identifies five research topics, specifies several key scientific objectives for each topic, and suggests ways to achieve all the objectives. The five AstRoMap Research Topics are • Research Topic 1: Origin and Evolution of Planetary Systems• Research Topic 2: Origins of Organic Compounds in Space• Research Topic 3: Rock-Water-Carbon Interactions, Organic Synthesis on Earth, and Steps to Life• Research Topic 4: Life and Habitability• Research Topic 5: Biosignatures as Facilitating Life Detection It is strongly recommended that steps be taken towards the definition and implementation of a European Astrobiology Platform (or Institute) to streamline and optimize the scientific return by using a coordinated infrastructure and funding system. Key Words: Astrobiology roadmap—Europe—Origin and evolution of life—Habitability—Life detection—Life in extreme environments. Astrobiology 16, 201–243.

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    Astrobiology
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    Article . 2016
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    Authors: Evgenia Mitsou; Vasiliki Pletsa; George T. Sotiroudis; Pierre Panine; +2 Authors

    Abstract A novel water-in-oil (W/O) microemulsion based on natural oils, namely extra virgin olive oil (EVOO) and sunflower oil (SO), in the presence of non-ionic surfactants was successfully formulated. The novel microemulsion was used as a carrier for gallic acid (GA) to assure its protection and efficacy upon nasal administration. The work presents evidence that this microemulsion can be used as a nasal formulation for the delivery of polar antioxidants, especially, after incorporation of chitosan (CH) in its aqueous phase. The structure of the system was studied by Small Angle X-ray Scattering (SAXS), Dynamic Light Scattering (DLS) and Electron Paramagnetic Resonance (EPR) spectroscopy techniques. By the addition of CH, the diameter of the microemulsion remained unaltered at 47 nm whereas after the incorporation of GA, micelles with 51 nm diameter were detected. The dynamic properties of the surfactant monolayer were affected by both the incorporation of CH and GA. Moreover, the antioxidant activity of the latter remained unaltered (99 %). RPMI 2650 cell line was used as the in vitro model for cell viability and for GA nasal epithelial transport studies after microemulsion administration. The results suggested that the nasal epithelial permeation of GA was enhanced, 3 h post administration, by the presence of 0.2 % v/v microemulsion in the culture medium. However, the concentration of the transported antioxidant in the presence of CH was higher indicating the polymer’s effect on the transport of the GA. The study revealed that nasal administration of hydrophilic antioxidants could be used as an alternative route besides oral administration.

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    Colloids and Surfaces B Biointerfaces
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  • Authors: Dionysios E. Raitsos; Samantha Lavender; Christos D. Maravelias; John Haralabous; +3 Authors

    Diatoms exist in almost every aquatic regime; they are responsible for ∼20% of global carbon fixation and ∼25% of global primary production, and are regarded as a key food for copepods, which are subsequently consumed by larger predators such as fish and marine mammals. A decreasing abundance and a vulnerability to climatic change in the North Atlantic Ocean have been reported in the literature. In the present work, a data matrix composed of concurrent satellite remote sensing and Continuous Plankton Recorder (CPR) in situ measurements was collated for the same spatial and temporal coverage in the Northeast Atlantic. Artificial neural networks (ANNs) were applied to recognize and learn the complex non-monotonic and non-linear relationships between diatom abundance and spatiotemporal environmental factors. Because of their ability to mimic non-linear systems, ANNs proved far more effective in modelling the diatom distribution in the marine ecosystem. The results of this study reveal that diatoms have a regular seasonal cycle, with their abundance most strongly influenced by sea surface temperature (SST) and light intensity. The models indicate that extreme positive SSTs decrease diatom abundances regardless of other climatic conditions. These results provide information on the ecology of diatoms that may advance our understanding of the potential response of diatoms to climatic change.

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