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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Alina Fiehn; Birgit Quack; Irene Stemmler; Franziska Ziska; +1 Authors

    Oceanic very short-lived substances (VSLSs), such as bromoform (CHBr3), contribute to stratospheric halogen loading and, thus, to ozone depletion. However, the amount, timing, and region of bromine delivery to the stratosphere through one of the main entrance gates, the Indian summer monsoon circulation, are still uncertain. In this study, we created two bromoform emission inventories with monthly resolution for the tropical Indian Ocean and west Pacific based on new in situ bromoform measurements and novel ocean biogeochemistry modeling. The mass transport and atmospheric mixing ratios of bromoform were modeled for the year 2014 with the particle dispersion model FLEXPART driven by ERA-Interim reanalysis. We compare results between two emission scenarios: (1) monthly averaged and (2) annually averaged emissions. Both simulations reproduce the atmospheric distribution of bromoform from ship- and aircraft-based observations in the boundary layer and upper troposphere above the Indian Ocean reasonably well. Using monthly resolved emissions, the main oceanic source regions for the stratosphere include the Arabian Sea and Bay of Bengal in boreal summer and the tropical west Pacific Ocean in boreal winter. The main stratospheric injection in boreal summer occurs over the southern tip of India associated with the high local oceanic sources and strong convection of the summer monsoon. In boreal winter more bromoform is entrained over the west Pacific than over the Indian Ocean. The annually averaged stratospheric injection of bromoform is in the same range whether using monthly averaged or annually averaged emissions in our Lagrangian calculations. However, monthly averaged emissions result in the highest mixing ratios within the Asian monsoon anticyclone in boreal summer and above the central Indian Ocean in boreal winter, while annually averaged emissions display a maximum above the west Indian Ocean in boreal spring. In the Asian summer monsoon anticyclone bromoform atmospheric mixing ratios vary by up to 50 % between using monthly averaged and annually averaged oceanic emissions. Our results underline that the seasonal and regional stratospheric bromine injection from the tropical Indian Ocean and west Pacific critically depend on the seasonality and spatial distribution of the VSLS emissions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Norwegian Open Resea...arrow_drop_down
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    OceanRep
    Article . 2018 . Peer-reviewed
    Data sources: OceanRep
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    DOAJ
    Article . 2018
    Data sources: DOAJ
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    Atmospheric Chemistry and Physics (ACP)
    Article . 2018 . Peer-reviewed
    License: CC BY
    Data sources: Crossref
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    MPG.PuRe
    Article . 2018
    License: CC BY
    Data sources: MPG.PuRe
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    MPG.PuRe
    Article . 2018
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    Atmospheric Chemistry and Physics (ACP)
    Article . Preprint
    License: CC BY
    Data sources: UnpayWall
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    https://doi.org/10.5194/acp-20...
    Preprint . 2018
    License: CC BY
    Data sources: Crossref
    Copernicus Publications
    Other literature type . 2019
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Norwegian Open Resea...arrow_drop_down
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      OceanRep
      Article . 2018 . Peer-reviewed
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      DOAJ
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      Atmospheric Chemistry and Physics (ACP)
      Article . 2018 . Peer-reviewed
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      MPG.PuRe
      Article . 2018
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      MPG.PuRe
      Article . 2018
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      Atmospheric Chemistry and Physics (ACP)
      Article . Preprint
      License: CC BY
      Data sources: UnpayWall
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      https://doi.org/10.5194/acp-20...
      Preprint . 2018
      License: CC BY
      Data sources: Crossref
      Copernicus Publications
      Other literature type . 2019
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Chris Ware; Jørgen Berge; Anders Jelmert; Steffen M. Olsen; +6 Authors

    Several decades of research on invasive marine species have yielded a broad understanding of the nature of species invasion mechanisms and associated threats globally. However, this is not true of the Arctic, a region where ongoing climatic changes may promote species invasion. Here, we evaluated risks associated with non-indigenous propagule loads discharged with ships' ballast water to the high-Arctic archipelago, Svalbard, as a case study for the wider Arctic. We sampled and identified transferred propagules using traditional and DNA barcoding techniques. We then assessed the suitability of the Svalbard coast for non-indigenous species under contemporary and future climate scenarios using ecophysiological models based on critical temperature and salinity reproductive thresholds. Ships discharging ballast water in Svalbard carried high densities of zooplankton (mean 1522 ± 335 SE individuals m−3), predominately comprised of indigenous species. Ballast water exchange did not prevent non-indigenous species introduction. Non-indigenous coastal species were present in all except one of 16 ballast water samples (mean 144 ± 67 SE individuals m−3), despite five of the eight ships exchanging ballast water en route. Of a total of 73 taxa, 36 species including 23 non-indigenous species were identified. Of those 23, sufficient data permitted evaluation of the current and future colonization potential for eight widely known invaders. With the exception of one of these species, modelled suitability indicated that the coast of Svalbard is unsuitable presently; under the 2100 Representative Concentration Pathway (RCP) 8·5 climate scenario, however, modelled suitability will favour colonization for six species. Synthesis and applications. We show that current ballast water management practices do not prevent non-indigenous species from being transferred to the Arctic. Consequences of these shortcomings will be shipping-route dependent, but will likely magnify over time: our models indicate future conditions will favour the colonization of non-indigenous species Arctic-wide. Invasion threats will be greatest where shipping transfers organisms across biogeographic realms, and for these shipping routes ballast water treatment technologies may be required to prevent impacts. Our results also highlight critical gaps in our understanding of ballast water management efficacy and prioritization. Thereby, our study provides an agenda for research and policy development. Published version. Source at http://doi.org/10.1111/1365-2664.12566.

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    Journal of Applied Ecology
    Article . 2015 . Peer-reviewed
    License: CC BY
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    Journal of Applied Ecology
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      Journal of Applied Ecology
      Article . 2015 . Peer-reviewed
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      Journal of Applied Ecology
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    Authors: Weber, Charlotte Teresa; Borit, Melania; Canolle, Fabien; Hnatkova, Eva; +3 Authors

    This report identifies transferable skills and competences relevant for early career researchers to gather during their doctoral training program and beyond, in order to increase their employability in multiple work sectors. A skills matrix and infographic (see Appendix) with nine different categories, containing a total of 66 transferable skills and competences, is presented. Advice on how to acquire and document these skills and competences is provided. Source at https://doi.org/10.5281/zenodo.1299178 More information at http://eurodoc.net/news/2018/press-release-eurodoc-report-on-transferable-skills-and-competences

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    https://zenodo.org/record/1299...
    Article . 2018
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    ZENODO
    Report . 2018
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    ZENODO
    Report . Other literature type . 2018
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      Article . 2018
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      Report . 2018
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      Report . Other literature type . 2018
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    Authors: Kleyheeg, Erik; van Leeuwen, C.H.A.; Nolet, B.A.; Soons, Merel; +2 Authors

    Plant populations in fragmented ecosystems rely largely on internal dispersal by animals. To unravel the mechanisms underlying this mode of dispersal, an increasing number of experimental feeding studies is carried out. However, while physical activity is known to affect vertebrate digestive processes, almost all current knowledge on mechanisms of internal seed dispersal has been obtained from experiments with resting animals. We investigated how physical activity of the mallard Anas platyrhynchos, probably the quantitatively most important biotic dispersal agent in aquatic habitats in the entire Northern Hemisphere, affects gut passage survival and retention time of ingested plant seeds. We fed seeds of nine common wetland plants to mallards trained to subsequently swim for six hours in a flume tank at different swimming speeds (activity levels). We compared gut passage survival and retention times of seeds against a control treatment with mallards resting in a conventional dry cage. Intact gut passage of seeds increased significantly with mallard activity (up to 80% in the fastest swimming treatment compared to the control), identifying reduced digestive efficiency due to increased metabolic rates as a mechanism enhancing the dispersal potential of ingested seeds. Gut passage speed was modestly accelerated (13% on average) by increased mallard activity, an effect partly obscured by the interaction between seed retention time and probability of digestion. Gut passage acceleration will be more pronounced in digestion‐resilient seed species, thereby modulating their dispersal distances. Our findings imply that seed dispersal potential by mallards calculated from previous experiments with resting birds is highly underestimated, while dispersal distances may be overestimated for some plant species. Similar effects of physical activity on digestive efficiency of mammals suggests that endozoochorous dispersal of plant seeds by vertebrates is more effective and plays a quantitatively more important ecological role in both terrestrial and aquatic ecosystems than previously thought.

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    Article . 2015
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    Article . 2014
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    Authors: Harvey, Ben P; Al-Janabi, Balsam; Broszeit, Stefanie; Cioffi, Rebekah; +14 Authors

    Research to date has suggested that both individual marine species and ecological processes are expected to exhibit diverse responses to the environmental effects of climate change. Evolutionary responses can occur on rapid (ecological) timescales, and yet studies typically do not consider the role that adaptive evolution will play in modulating biological responses to climate change. Investigations into such responses have typically been focused at particular biological levels (e.g., cellular, population, community), often lacking interactions among levels. Since all levels of biological organisation are sensitive to global climate change, there is a need to elucidate how different processes and hierarchical interactions will influence species fitness. Therefore, predicting the responses of communities and populations to global change will require multidisciplinary efforts across multiple levels of hierarchy, from the genetic and cellular to communities and ecosystems. Eventually, this may allow us to establish the role that acclimatisation and adaptation will play in determining marine community structures in future scenarios.

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    Article . 2014
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    Article . 2014
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    Authors: Eynard-bontemps, Guillaume; Abernathey, Ryan; Hamman, Joseph; Ponte, Aurelien; +1 Authors

    Pangeo[1] is a community-driven effort for open-source big data initially focused on the Earth System Sciences. One of its primary goals is to enable scientists in analyzing petascale datasets both on classical high-performance computing (HPC) and on public cloud infrastructure. In only a few years, Pangeo has grown into a very productive community collaborating on the development of open-source analysis tools for science. It provides a set of example deployments based on open-source Scientific Python packages like Jupyter[2], Dask[3], and Xarray[4] that bring together scientists and developer with their actual use-cases. In this paper, we first describe Pangeo ecosystem and community. We then present its impact on the work of scientists from CNES on the HPC deployment there. We conclude with a future outlook for Pangeo in this agency and beyond.

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    Authors: H. Goelzer; H. Goelzer; H. Goelzer; S. Nowicki; +49 Authors

    Abstract. The Greenland ice sheet is one of the largest contributors to global meansea-level rise today and is expected to continue to lose mass as the Arcticcontinues to warm. The two predominant mass loss mechanisms are increasedsurface meltwater run-off and mass loss associated with the retreat ofmarine-terminating outlet glaciers. In this paper we use a large ensemble ofGreenland ice sheet models forced by output from a representative subset ofthe Coupled Model Intercomparison Project (CMIP5) global climate models to project ice sheet changes and sea-level risecontributions over the 21st century. The simulations are part of theIce Sheet Model Intercomparison Project for CMIP6 (ISMIP6). We estimate thesea-level contribution together with uncertainties due to future climateforcing, ice sheet model formulations and ocean forcing for the twogreenhouse gas concentration scenarios RCP8.5 and RCP2.6. The resultsindicate that the Greenland ice sheet will continue to lose mass in bothscenarios until 2100, with contributions of 90±50 and 32±17 mm to sea-level rise for RCP8.5 and RCP2.6, respectively. The largestmass loss is expected from the south-west of Greenland, which is governed bysurface mass balance changes, continuing what is already observed today.Because the contributions are calculated against an unforced controlexperiment, these numbers do not include any committed mass loss, i.e. massloss that would occur over the coming century if the climate forcingremained constant. Under RCP8.5 forcing, ice sheet model uncertaintyexplains an ensemble spread of 40 mm, while climate model uncertainty andocean forcing uncertainty account for a spread of 36 and 19 mm,respectively. Apart from those formally derived uncertainty ranges, thelargest gap in our knowledge is about the physical understanding andimplementation of the calving process, i.e. the interaction of the ice sheetwith the ocean. info:eu-repo/semantics/published

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    DI-fusion
    Article . 2020 . Peer-reviewed
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    St Andrews Research Repository
    Article . 2020 . Peer-reviewed
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    The Cryosphere
    Article . 2020
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    The Cryosphere (TC)
    Article . 2020
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    https://doi.org/10.5194/tc-201...
    Preprint . 2020
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    The Cryosphere; The Cryosphere (TC)
    Article . Preprint . 2020
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      Article . 2020 . Peer-reviewed
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      The Cryosphere
      Article . 2020
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      https://doi.org/10.5194/tc-201...
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      The Cryosphere; The Cryosphere (TC)
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      Copernicus Publications
      Other literature type . 2020
      https://doi.org/10.5194/egusph...
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    Authors: Borgonie, Gaëtan; Linage-Alvarez, Borja; Ojo, Abidemi; Shivambu, Steven; +9 Authors

    Stalactites (CaCO3 and salt) from water seeps are frequently encountered in ceilings of mine tunnels whenever they intersect water-bearing faults or fractures. To determine whether stalactites could be mineralized traps for indigenous fracture water microorganisms, we analyzed stalactites collected from three different mines ranging in depth from 1.3 to 3.1 km. During sampling in Beatrix gold mine (1.4 km beneath the surface), central South Africa, CaCO3 stalactites growing on the mine tunnel ceiling were collected and observed, in two cases, to contain a living obligate brackish water/marine nematode species, Monhystrella parvella. After sterilization of the outer surface, mineral layers were physically removed from the outside to the interior, and DNA extracted. Based upon 16S and 18S rRNA gene sequencing, Archaea, Bacteria, and Eukarya in different combinations were detected for each layer. Using CT scan and electron microscopy the inner structure of CaCO3 and salt stalactites were analyzed. CaCO3 stalactites show a complex pattern of lamellae carrying bacterially precipitated mineral structures. Nematoda were clearly identified between these layers confirming that bacteria and nematodes live inside the stalactites and not only in the central straw. Salt stalactites exhibit a more uniform internal structure. Surprisingly, several Bacteria showing highest sequence identities to marine species were identified. This, together with the observation that the nematode M. parvella recovered from Beatrix gold mine stalactite can only survive in a salty environment makes the origin of the deep subsurface colonization enigmatic. The possibility of a Permian origin of fracture fluids is discussed. Our results indicate stalactites are suitable for biodiversity recovery and act as natural traps for microorganisms in the fissure water long after the water that formed the stalactite stopped flowing.

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    Frontiers in Microbiology
    Article . 2015 . Peer-reviewed
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    DOAJ-Articles
    Article . 2015
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    Frontiers in Microbiology
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      Frontiers in Microbiology
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    Authors: Isaac Ankamah-Yeboah; Claire W. Armstrong; Stephen Hynes; Bui Bich Xuan; +1 Authors

    ecent events around the world have revealed varying degrees of public support for climate change and environmental regulation. Applying a latent class logit model, this study investigates Norwegian and Scottish public’s economic support for proposed deep sea management policies for novel attributes, identifying the presence of preference heterogeneity. Marine litter and health of fish stocks were the attributes with the highest values in absolute terms. This was followed by the size of the protected area coverage, whilst the creation of jobs was the least valued. The results highlight public support for the further collective action required by the EU in moving beyond the 2020 objective of achieving good environmental status of Europe’s seas, despite the low WTP values of the minority classes in each country. This is an Accepted Manuscript of an article published by Taylor & Francis in the Journal of Environmental Economics and Policy on 18 May 2021, available online: https://doi.org/10.1080/21606544.2021.1924286.

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    Authors: Gutscher, M. A.; Klingelhoefer, F.; Theunissen, T.; Spakman, W.; +5 Authors

    Subduction mega-thrust earthquakes in the SW Ryukyu trench pose a seismic and tsunami hazard. One of the objectives of this study is to estimate the downdip width of the seismogenic zone using numerical modeling to determine the temperature distribution along the plate interface. However, this approach depends strongly on the thermal parameters of the subducting slab. While the Philippine Sea plate (PSP) subducting beneath the central and eastern Ryukyu arc is of Eocene age (35-50 Ma), its age west of the Gagua Ridge is uncertain, with proposed ages ranging from Lower Cretaceous (140 Ma) to Upper Eocene (35 Ma). Since the sparse available heat flow data are insufficient to resolve this debate, both end-member hypotheses are tested as input parameters. We examined two transects at 122.5°E and 123.5°E on either side of the N-S trending, 4-km high, Gagua Ridge. The shallow forearc geometry is obtained from wide-angle seismic data. The deep slab geometry was obtained from hypocenter distribution and tomography. For an Eocene slab age, we obtain a 100 km and 110 km wide seismogenic zone (between the 150 °C and 350 °C isotherms) west and east of Gagua Ridge, respectively. This is in good agreement with the observed distribution of hypocenters. Using a Cretaceous slab west of Gagua Ridge predicts a deep seismogenic zone (25 km-60 km depth), inconsistent with observed thrust earthquakes. Tomographic images at 122.5°E and 123.5°E show a similar slab thickness of 70-80 km suggesting that the oceanic lithosphere has a young (Eocene) thermal age. The westernmost PSP (Huatung Basin) may have been thermally rejuvenated by mantle convection near the slab corner. The tectonic history since 6 Ma (transition from subduction to collision beneath Taiwan) may have also perturbed the thermal structure. International audience

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    Tectonophysics
    Article . 2016 . Peer-reviewed
    License: Elsevier TDM
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      Tectonophysics
      Article . 2016 . Peer-reviewed
      License: Elsevier TDM
      Data sources: Crossref; NARCIS
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    Authors: Alina Fiehn; Birgit Quack; Irene Stemmler; Franziska Ziska; +1 Authors

    Oceanic very short-lived substances (VSLSs), such as bromoform (CHBr3), contribute to stratospheric halogen loading and, thus, to ozone depletion. However, the amount, timing, and region of bromine delivery to the stratosphere through one of the main entrance gates, the Indian summer monsoon circulation, are still uncertain. In this study, we created two bromoform emission inventories with monthly resolution for the tropical Indian Ocean and west Pacific based on new in situ bromoform measurements and novel ocean biogeochemistry modeling. The mass transport and atmospheric mixing ratios of bromoform were modeled for the year 2014 with the particle dispersion model FLEXPART driven by ERA-Interim reanalysis. We compare results between two emission scenarios: (1) monthly averaged and (2) annually averaged emissions. Both simulations reproduce the atmospheric distribution of bromoform from ship- and aircraft-based observations in the boundary layer and upper troposphere above the Indian Ocean reasonably well. Using monthly resolved emissions, the main oceanic source regions for the stratosphere include the Arabian Sea and Bay of Bengal in boreal summer and the tropical west Pacific Ocean in boreal winter. The main stratospheric injection in boreal summer occurs over the southern tip of India associated with the high local oceanic sources and strong convection of the summer monsoon. In boreal winter more bromoform is entrained over the west Pacific than over the Indian Ocean. The annually averaged stratospheric injection of bromoform is in the same range whether using monthly averaged or annually averaged emissions in our Lagrangian calculations. However, monthly averaged emissions result in the highest mixing ratios within the Asian monsoon anticyclone in boreal summer and above the central Indian Ocean in boreal winter, while annually averaged emissions display a maximum above the west Indian Ocean in boreal spring. In the Asian summer monsoon anticyclone bromoform atmospheric mixing ratios vary by up to 50 % between using monthly averaged and annually averaged oceanic emissions. Our results underline that the seasonal and regional stratospheric bromine injection from the tropical Indian Ocean and west Pacific critically depend on the seasonality and spatial distribution of the VSLS emissions.

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    OceanRep
    Article . 2018 . Peer-reviewed
    Data sources: OceanRep
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    DOAJ
    Article . 2018
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    Atmospheric Chemistry and Physics (ACP)
    Article . 2018 . Peer-reviewed
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    MPG.PuRe
    Article . 2018
    License: CC BY
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    MPG.PuRe
    Article . 2018
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    Atmospheric Chemistry and Physics (ACP)
    Article . Preprint
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    https://doi.org/10.5194/acp-20...
    Preprint . 2018
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    Copernicus Publications
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      OceanRep
      Article . 2018 . Peer-reviewed
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      Article . 2018
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      Atmospheric Chemistry and Physics (ACP)
      Article . 2018 . Peer-reviewed
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      MPG.PuRe
      Article . 2018
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      MPG.PuRe
      Article . 2018
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      Atmospheric Chemistry and Physics (ACP)
      Article . Preprint
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      https://doi.org/10.5194/acp-20...
      Preprint . 2018
      License: CC BY
      Data sources: Crossref
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      Other literature type . 2019
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    Authors: Chris Ware; Jørgen Berge; Anders Jelmert; Steffen M. Olsen; +6 Authors

    Several decades of research on invasive marine species have yielded a broad understanding of the nature of species invasion mechanisms and associated threats globally. However, this is not true of the Arctic, a region where ongoing climatic changes may promote species invasion. Here, we evaluated risks associated with non-indigenous propagule loads discharged with ships' ballast water to the high-Arctic archipelago, Svalbard, as a case study for the wider Arctic. We sampled and identified transferred propagules using traditional and DNA barcoding techniques. We then assessed the suitability of the Svalbard coast for non-indigenous species under contemporary and future climate scenarios using ecophysiological models based on critical temperature and salinity reproductive thresholds. Ships discharging ballast water in Svalbard carried high densities of zooplankton (mean 1522 ± 335 SE individuals m−3), predominately comprised of indigenous species. Ballast water exchange did not prevent non-indigenous species introduction. Non-indigenous coastal species were present in all except one of 16 ballast water samples (mean 144 ± 67 SE individuals m−3), despite five of the eight ships exchanging ballast water en route. Of a total of 73 taxa, 36 species including 23 non-indigenous species were identified. Of those 23, sufficient data permitted evaluation of the current and future colonization potential for eight widely known invaders. With the exception of one of these species, modelled suitability indicated that the coast of Svalbard is unsuitable presently; under the 2100 Representative Concentration Pathway (RCP) 8·5 climate scenario, however, modelled suitability will favour colonization for six species. Synthesis and applications. We show that current ballast water management practices do not prevent non-indigenous species from being transferred to the Arctic. Consequences of these shortcomings will be shipping-route dependent, but will likely magnify over time: our models indicate future conditions will favour the colonization of non-indigenous species Arctic-wide. Invasion threats will be greatest where shipping transfers organisms across biogeographic realms, and for these shipping routes ballast water treatment technologies may be required to prevent impacts. Our results also highlight critical gaps in our understanding of ballast water management efficacy and prioritization. Thereby, our study provides an agenda for research and policy development. Published version. Source at http://doi.org/10.1111/1365-2664.12566.

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    Journal of Applied Ecology
    Article . 2015 . Peer-reviewed
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    Journal of Applied Ecology
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      Journal of Applied Ecology
      Article . 2015 . Peer-reviewed
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    Authors: Weber, Charlotte Teresa; Borit, Melania; Canolle, Fabien; Hnatkova, Eva; +3 Authors

    This report identifies transferable skills and competences relevant for early career researchers to gather during their doctoral training program and beyond, in order to increase their employability in multiple work sectors. A skills matrix and infographic (see Appendix) with nine different categories, containing a total of 66 transferable skills and competences, is presented. Advice on how to acquire and document these skills and competences is provided. Source at https://doi.org/10.5281/zenodo.1299178 More information at http://eurodoc.net/news/2018/press-release-eurodoc-report-on-transferable-skills-and-competences

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    https://zenodo.org/record/1299...
    Article . 2018
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    Report . 2018
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    Authors: Kleyheeg, Erik; van Leeuwen, C.H.A.; Nolet, B.A.; Soons, Merel; +2 Authors

    Plant populations in fragmented ecosystems rely largely on internal dispersal by animals. To unravel the mechanisms underlying this mode of dispersal, an increasing number of experimental feeding studies is carried out. However, while physical activity is known to affect vertebrate digestive processes, almost all current knowledge on mechanisms of internal seed dispersal has been obtained from experiments with resting animals. We investigated how physical activity of the mallard Anas platyrhynchos, probably the quantitatively most important biotic dispersal agent in aquatic habitats in the entire Northern Hemisphere, affects gut passage survival and retention time of ingested plant seeds. We fed seeds of nine common wetland plants to mallards trained to subsequently swim for six hours in a flume tank at different swimming speeds (activity levels). We compared gut passage survival and retention times of seeds against a control treatment with mallards resting in a conventional dry cage. Intact gut passage of seeds increased significantly with mallard activity (up to 80% in the fastest swimming treatment compared to the control), identifying reduced digestive efficiency due to increased metabolic rates as a mechanism enhancing the dispersal potential of ingested seeds. Gut passage speed was modestly accelerated (13% on average) by increased mallard activity, an effect partly obscured by the interaction between seed retention time and probability of digestion. Gut passage acceleration will be more pronounced in digestion‐resilient seed species, thereby modulating their dispersal distances. Our findings imply that seed dispersal potential by mallards calculated from previous experiments with resting birds is highly underestimated, while dispersal distances may be overestimated for some plant species. Similar effects of physical activity on digestive efficiency of mammals suggests that endozoochorous dispersal of plant seeds by vertebrates is more effective and plays a quantitatively more important ecological role in both terrestrial and aquatic ecosystems than previously thought.

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    Oikos
    Article . 2015
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    Article . 2014
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    Authors: Harvey, Ben P; Al-Janabi, Balsam; Broszeit, Stefanie; Cioffi, Rebekah; +14 Authors

    Research to date has suggested that both individual marine species and ecological processes are expected to exhibit diverse responses to the environmental effects of climate change. Evolutionary responses can occur on rapid (ecological) timescales, and yet studies typically do not consider the role that adaptive evolution will play in modulating biological responses to climate change. Investigations into such responses have typically been focused at particular biological levels (e.g., cellular, population, community), often lacking interactions among levels. Since all levels of biological organisation are sensitive to global climate change, there is a need to elucidate how different processes and hierarchical interactions will influence species fitness. Therefore, predicting the responses of communities and populations to global change will require multidisciplinary efforts across multiple levels of hierarchy, from the genetic and cellular to communities and ecosystems. Eventually, this may allow us to establish the role that acclimatisation and adaptation will play in determining marine community structures in future scenarios.

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    Water
    Article . 2014
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    Brage NMBU
    Article . 2014
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    Authors: Eynard-bontemps, Guillaume; Abernathey, Ryan; Hamman, Joseph; Ponte, Aurelien; +1 Authors

    Pangeo[1] is a community-driven effort for open-source big data initially focused on the Earth System Sciences. One of its primary goals is to enable scientists in analyzing petascale datasets both on classical high-performance computing (HPC) and on public cloud infrastructure. In only a few years, Pangeo has grown into a very productive community collaborating on the development of open-source analysis tools for science. It provides a set of example deployments based on open-source Scientific Python packages like Jupyter[2], Dask[3], and Xarray[4] that bring together scientists and developer with their actual use-cases. In this paper, we first describe Pangeo ecosystem and community. We then present its impact on the work of scientists from CNES on the HPC deployment there. We conclude with a future outlook for Pangeo in this agency and beyond.

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    Authors: H. Goelzer; H. Goelzer; H. Goelzer; S. Nowicki; +49 Authors

    Abstract. The Greenland ice sheet is one of the largest contributors to global meansea-level rise today and is expected to continue to lose mass as the Arcticcontinues to warm. The two predominant mass loss mechanisms are increasedsurface meltwater run-off and mass loss associated with the retreat ofmarine-terminating outlet glaciers. In this paper we use a large ensemble ofGreenland ice sheet models forced by output from a representative subset ofthe Coupled Model Intercomparison Project (CMIP5) global climate models to project ice sheet changes and sea-level risecontributions over the 21st century. The simulations are part of theIce Sheet Model Intercomparison Project for CMIP6 (ISMIP6). We estimate thesea-level contribution together with uncertainties due to future climateforcing, ice sheet model formulations and ocean forcing for the twogreenhouse gas concentration scenarios RCP8.5 and RCP2.6. The resultsindicate that the Greenland ice sheet will continue to lose mass in bothscenarios until 2100, with contributions of 90±50 and 32±17 mm to sea-level rise for RCP8.5 and RCP2.6, respectively. The largestmass loss is expected from the south-west of Greenland, which is governed bysurface mass balance changes, continuing what is already observed today.Because the contributions are calculated against an unforced controlexperiment, these numbers do not include any committed mass loss, i.e. massloss that would occur over the coming century if the climate forcingremained constant. Under RCP8.5 forcing, ice sheet model uncertaintyexplains an ensemble spread of 40 mm, while climate model uncertainty andocean forcing uncertainty account for a spread of 36 and 19 mm,respectively. Apart from those formally derived uncertainty ranges, thelargest gap in our knowledge is about the physical understanding andimplementation of the calving process, i.e. the interaction of the ice sheetwith the ocean. info:eu-repo/semantics/published

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    DI-fusion
    Article . 2020 . Peer-reviewed
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    St Andrews Research Repository
    Article . 2020 . Peer-reviewed
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    The Cryosphere
    Article . 2020
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    The Cryosphere (TC)
    Article . 2020
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    https://doi.org/10.5194/tc-201...
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    The Cryosphere; The Cryosphere (TC)
    Article . Preprint . 2020
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    Copernicus Publications
    Other literature type . 2020
    https://doi.org/10.5194/egusph...
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      St Andrews Research Repository
      Article . 2020 . Peer-reviewed
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      The Cryosphere
      Article . 2020
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      The Cryosphere (TC)
      Article . 2020
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      https://doi.org/10.5194/tc-201...
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      DOAJ
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      The Cryosphere; The Cryosphere (TC)
      Article . Preprint . 2020
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      Copernicus Publications
      Other literature type . 2020
      https://doi.org/10.5194/egusph...
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    Authors: Borgonie, Gaëtan; Linage-Alvarez, Borja; Ojo, Abidemi; Shivambu, Steven; +9 Authors

    Stalactites (CaCO3 and salt) from water seeps are frequently encountered in ceilings of mine tunnels whenever they intersect water-bearing faults or fractures. To determine whether stalactites could be mineralized traps for indigenous fracture water microorganisms, we analyzed stalactites collected from three different mines ranging in depth from 1.3 to 3.1 km. During sampling in Beatrix gold mine (1.4 km beneath the surface), central South Africa, CaCO3 stalactites growing on the mine tunnel ceiling were collected and observed, in two cases, to contain a living obligate brackish water/marine nematode species, Monhystrella parvella. After sterilization of the outer surface, mineral layers were physically removed from the outside to the interior, and DNA extracted. Based upon 16S and 18S rRNA gene sequencing, Archaea, Bacteria, and Eukarya in different combinations were detected for each layer. Using CT scan and electron microscopy the inner structure of CaCO3 and salt stalactites were analyzed. CaCO3 stalactites show a complex pattern of lamellae carrying bacterially precipitated mineral structures. Nematoda were clearly identified between these layers confirming that bacteria and nematodes live inside the stalactites and not only in the central straw. Salt stalactites exhibit a more uniform internal structure. Surprisingly, several Bacteria showing highest sequence identities to marine species were identified. This, together with the observation that the nematode M. parvella recovered from Beatrix gold mine stalactite can only survive in a salty environment makes the origin of the deep subsurface colonization enigmatic. The possibility of a Permian origin of fracture fluids is discussed. Our results indicate stalactites are suitable for biodiversity recovery and act as natural traps for microorganisms in the fissure water long after the water that formed the stalactite stopped flowing.

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    Frontiers in Microbiology
    Article . 2015 . Peer-reviewed
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    DOAJ-Articles
    Article . 2015
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    Frontiers in Microbiology
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      Frontiers in Microbiology
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    Authors: Isaac Ankamah-Yeboah; Claire W. Armstrong; Stephen Hynes; Bui Bich Xuan; +1 Authors

    ecent events around the world have revealed varying degrees of public support for climate change and environmental regulation. Applying a latent class logit model, this study investigates Norwegian and Scottish public’s economic support for proposed deep sea management policies for novel attributes, identifying the presence of preference heterogeneity. Marine litter and health of fish stocks were the attributes with the highest values in absolute terms. This was followed by the size of the protected area coverage, whilst the creation of jobs was the least valued. The results highlight public support for the further collective action required by the EU in moving beyond the 2020 objective of achieving good environmental status of Europe’s seas, despite the low WTP values of the minority classes in each country. This is an Accepted Manuscript of an article published by Taylor & Francis in the Journal of Environmental Economics and Policy on 18 May 2021, available online: https://doi.org/10.1080/21606544.2021.1924286.

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    Authors: Gutscher, M. A.; Klingelhoefer, F.; Theunissen, T.; Spakman, W.; +5 Authors

    Subduction mega-thrust earthquakes in the SW Ryukyu trench pose a seismic and tsunami hazard. One of the objectives of this study is to estimate the downdip width of the seismogenic zone using numerical modeling to determine the temperature distribution along the plate interface. However, this approach depends strongly on the thermal parameters of the subducting slab. While the Philippine Sea plate (PSP) subducting beneath the central and eastern Ryukyu arc is of Eocene age (35-50 Ma), its age west of the Gagua Ridge is uncertain, with proposed ages ranging from Lower Cretaceous (140 Ma) to Upper Eocene (35 Ma). Since the sparse available heat flow data are insufficient to resolve this debate, both end-member hypotheses are tested as input parameters. We examined two transects at 122.5°E and 123.5°E on either side of the N-S trending, 4-km high, Gagua Ridge. The shallow forearc geometry is obtained from wide-angle seismic data. The deep slab geometry was obtained from hypocenter distribution and tomography. For an Eocene slab age, we obtain a 100 km and 110 km wide seismogenic zone (between the 150 °C and 350 °C isotherms) west and east of Gagua Ridge, respectively. This is in good agreement with the observed distribution of hypocenters. Using a Cretaceous slab west of Gagua Ridge predicts a deep seismogenic zone (25 km-60 km depth), inconsistent with observed thrust earthquakes. Tomographic images at 122.5°E and 123.5°E show a similar slab thickness of 70-80 km suggesting that the oceanic lithosphere has a young (Eocene) thermal age. The westernmost PSP (Huatung Basin) may have been thermally rejuvenated by mantle convection near the slab corner. The tectonic history since 6 Ma (transition from subduction to collision beneath Taiwan) may have also perturbed the thermal structure. International audience

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    Tectonophysics
    Article . 2016 . Peer-reviewed
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Mémoires en Sciences...arrow_drop_down
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Tectonophysics
      Article . 2016 . Peer-reviewed
      License: Elsevier TDM
      Data sources: Crossref; NARCIS
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
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      This Research product is the result of merged Research products in OpenAIRE.

      You have already added works in your ORCID record related to the merged Research product.