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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Rosalie Fuchs; Christel Pinazo; Pascal Douillet; Marion Fraysse; +3 Authors

    International audience; Since 2005, wind-driven 'sporadic' coastal upwelling events have been identified off the southwestern reef of New Caledonia. Several studies have described the main physical processes and induced surface patterns using 1D and 3D modelling, as well as in situ measurements. Previous models were applied at the mesoscale without taking into account the lagoon. Using a recently developed 3D coupled physical-biogeochemical model that considers the complex ocean-lagoon interface, we aim to understand better the impact of the upwelling on the lagoon. The model was found to be in good agreement with measured data reported in previous publications about two upwelling events. However, in general, levels of surface chlorophyll-a were overestimated by the model in the upwelling area when compared to ocean colour data and several hypotheses have been proposed to explain the discrepancy. We then tracked rich upwelled water using a forward Lagrangian transport analysis. Upwelled waters from the upper nutricline were found to be able to reach the South West lagoon. An anti-cyclonic eddy was detected near the upwelling area, potentially responsible, in part, for the rich water intrusions into the lagoon.

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    Horizon / Pleins textes
    Other literature type . 2013
    Estuarine Coastal and Shelf Science
    Article . 2013 . Peer-reviewed
    Data sources: Crossref
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    Authors: Chia-Te Chien; Tal Benaltabet; Adi Torfstein; Adina Paytan;

    Lead concentrations [Pb] and isotope ratios (Pb-206/Pb-207, Pb-208/Pb-207) have been measured in samples of total suspended particulate (TSP) aerosols, seawater, and suspended and sinking particles in the Gulf of Aqaba (GOA), Red Sea. Isotope ratios of Pb in seawater and in the soluble fraction of Pb in atmospheric TSP were similar suggesting that TSP is an important source of Pb in this area. Pb concentrations in seawater measured in this study (max 76.8 pmol kg(-1)) were much lower than those recorded at the same location in 2003-2004 (up to 1000 pmol kg(-1)). Changes in Pb isotope ratios in TSP depositions in these years indicate that leaded gasoline was responsible for the high dissolved Pb in GOA more than a decade ago and that recent regulation reduced Pb contamination. The similarity in Pb isotope ratios in suspended and sinking particles implies close interactions between these two size fractions. This study demonstrates the effect of the phasing out of leaded gasoline on TSP and seawater Pb chemistry in the Northern GOA; the rate of change in dissolved Pb concentrations in the GOA is faster than that reported for the open ocean possibly due to higher particle scavenging and the relatively short residence time of deep water in the Basin.

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    Environmental Science & Technology
    Article . 2019 . Peer-reviewed
    License: STM Policy #29
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      Environmental Science & Technology
      Article . 2019 . Peer-reviewed
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    Developed decades ago for spatial choice problems related to zoning in the urban planning field, multicriteria analysis (MCA) has more recently been applied to environmental conflicts and presented in several documented cases for the creation of protected area management plans. Its application is considered here for the development of zoning as part of a proposed marine protected area management plan. The case study incorporates specially-explicit conservation features while considering stakeholder preferences, expert opinion and characteristics of data quality. It involves the weighting of criteria using a modified analytical hierarchy process. Experts ranked physical attributes which include socio-economically valued physical features. The parameters used for the ranking of (physical) attributes important for socio-economic reasons are derived from the field of ecosystem services assessment. Inclusion of these feature values results in protection that emphasizes those areas closest to shore, most likely because of accessibility and familiarity parameters and because of data biases. Therefore, other spatial conservation prioritization methods should be considered to supplement the MCA and efforts should be made to improve data about ecosystem service values farther from shore. Otherwise, the MCA method allows incorporation of expert and stakeholder preferences and ecosystem services values while maintaining the advantages of simplicity and clarity.

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    PLoS ONE; OpenAPC Global Initiative
    Article . Conference object . 2016 . Peer-reviewed
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      Article . Conference object . 2016 . Peer-reviewed
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    Authors: Gülşen Timur; Çiğdem Ürkü;

    This study was carried out to detect Lactococcus garvieae from experimentally infected rainbow trout (Oncorhynchus mykiss, W.) using bacteriological, serological, and histopathological techniques. Rainbow trout were experimentally infected with two Lactococcus garvieae strains (L1 and L2) by intraperitonal injection. These strains caused bilateral exophthalmia with periocular hemorrhage, corneal opacification, darkening of the skin, strong internal congestion in the visceral organs, and enlargement of the spleen in the infected rainbow trout. The two L. garvieae strains were re-isolated from experimentally infected fish groups and identified with standard biochemical methods and API 20 STREP system. The presence of L. garvieae in the tissue of experimentally infected fish was confirmed by Indirect Fluorescent Antibody Technique (IFAT). The humoral antibody response of the infected fish was confirmed by slide agglutination, IFAT, and Enzyme Linked Immunosorbent Assay (ELISA). Histopathologically, liquefactive necrosis in the liver, spleen, and kidney, epithelial cells hyperplasia, hemorrhages and telangiectasia of the gill filaments, and sub-retinal hemorrhages in the eyes were observed.

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    Israeli Journal of Aquaculture - Bamidgeh
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    Israeli Journal of Aquaculture - Bamidgeh
    Article . 2014 . Peer-reviewed
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      Israeli Journal of Aquaculture - Bamidgeh
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      Israeli Journal of Aquaculture - Bamidgeh
      Article . 2014 . Peer-reviewed
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    Authors: Jiarui Liu; André Pellerin; Gilad Antler; Gareth Izon; +6 Authors

    Sediment-hosted marine sulfur cycling has played a significant role in regulating Earth's surface chemistry over our planet's history. Microbially-mediated reactions involving sulfur are often accompanied by sulfur isotope fractionation that, in turn, is captured by sulfate and sulfide minerals, providing the opportunity to track changes in the microbial utilization of sulfur and thus the marine sulfur cycle. Studying sulfur diagenesis within the Bornholm Basin, Baltic Sea, we explore the interplay between carbon, sulfur and iron, focusing on the fate of sulfur and the dynamics of the sulfur and oxygen isotopic response as a function of the varying thickness of the organic carbon-rich Holocene Mud Layer (HML) across the basin. Using a one-dimensional reaction-transport model, porewater sulfate and sulfide profiles were used to calculate net sulfate reduction rates (SRR) and net sulfide production rates, respectively. These calculations suggest a positive relationship between the thickness of the HML and net rates of sulfate reduction and sulfide production. Given that ascending sulfide is enriched in 34S relative to that produced in-situ, a heightened sulfide flux promotes spatially variable precipitation of 34S-enriched pyrite (δ34S ≈ −10‰) close to the sediment–water interface. Modeling results indicate that this isotopically “heavy” sulfide is formed as a consequence of mixing between ascending sulfide (up to +6.3‰) and that produced in-situ (ca. −40‰). Further, we show that the sulfur and oxygen isotopic composition of porewater sulfate is controlled by the net SRR: when the net SRR is high (i.e., in sulfide-replete settings) the downcore increase in δ18OSO4 is dampened relative to increase in δ34SSO4, whereas when net SRR is low (i.e., in iron-rich parts of the basin) downcore δ18OSO4 values increase while δ34SSO4 values remain invariant. We conclude that sedimentation rates and open system diffusion strongly influence the distribution of sulfur species and their sulfur isotopic composition, as well as the oxygen isotopic composition of sulfate, through the interaction between iron, sulfur and methane. This work highlights the importance of considering diffusion to better understand open system diagenesis and the δ34S signatures of sulfate and sulfide in both modern settings and ancient rocks.

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    The depth distribution of reef-building corals exposes their photosynthetic symbionts of the genus Symbiodinium to extreme gradients in the intensity and spectral quality of the ambient light environment. Characterizing the mechanisms used by the coral holobiont to respond to the low intensity and reduced spectral composition of the light environment in deeper reefs (greater than 20 m) is fundamental to our understanding of the functioning and structure of reefs across depth gradients. Here, we demonstrate that host pigments, specifically photoconvertible red fluorescent proteins (pcRFPs), can promote coral adaptation/acclimatization to deeper-water light environments by transforming the prevalent blue light into orange-red light, which can penetrate deeper within zooxanthellae-containing tissues; this facilitates a more homogeneous distribution of photons across symbiont communities. The ecological importance of pcRFPs in deeper reefs is supported by the increasing proportion of red fluorescent corals with depth (measured down to 45 m) and increased survival of colour morphs with strong expression of pcRFPs in long-term light manipulation experiments. In addition to screening by host pigments from high light intensities in shallow water, the spectral transformation observed in deeper-water corals highlights the importance of GFP-like protein expression as an ecological mechanism to support the functioning of the coral– Symbiodinium association across steep environmental gradients.

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    Proceedings of the Royal Society B Biological Sciences; OpenAPC Global Initiative
    Article . Conference object . 2017 . Peer-reviewed
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      Proceedings of the Royal Society B Biological Sciences; OpenAPC Global Initiative
      Article . Conference object . 2017 . Peer-reviewed
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    Authors: Assaf Yasur-Landau; Gilad Shtienberg; Gil Gambash; Giorgio Spada; +6 Authors

    This article presents new archaeological observations and multidisciplinary research from Dor, Israel to establish a more reliable relative sea level for the Carmel Coast and Southern Levant between the Middle Bronze Age and the Roman period (ca. 3500–1800 y BP). Our record indicates a period of low relative sea level, around -2.5 m below present, from the Middle Bronze Age to the Hellenistic period (ca. 3500–2200 y BP). This was followed by a rapid rise to present levels, starting in the Hellenistic period and concluding during the Roman period (ca. 2200–1800 y BP). These Roman levels agree with other relative sea-level indications from Israel and other tectonically stable areas in the Mediterranean. Several relative sea-level reconstruction models carried out in the current study provide different predictions due to their parameters and do not model the changes observed from field data which points to a non-isostatic origin for the changes. Long-term low stable Iron Age relative sea level can be seen in Dor, where Iron Age harbor structures remain around the same elevation between ca. 3100–2700 y BP. A similar pattern occurs at Atlit, the Iron Age harbor to the north used continuously from ca. 2900 y BP to the beginning of the Hellenistic period (ca. 2200 y BP). An examination of historical and archaeological sources reveals decline and occasional disappearance of Hellenistic sites along the coast of Israel at ca. 2200 y BP (2ndcentury BCE), as in the case of Yavneh Yam, Ashdod Yam, Straton’s Tower, and tel Taninim. In Akko-Ptolemais, the large harbor installations built in the Hellenistic period were never replaced by a substantial Roman harbor. The conclusions of this research are thus relevant for the sea-level research community and for the historical analyses of the Israeli and South Levantine coastline.

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    PLoS ONE
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    Article . 2021
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      Article . 2021
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    Authors: Stéphanie Jacquet; Claire Garros; Eric Lombaert; Catherine Walton; +36 Authors

    AbstractUnderstanding the demographic history and genetic make‐up of colonizing species is critical for inferring population sources and colonization routes. This is of main interest for designing accurate control measures in areas newly colonized by vector species of economically important pathogens. The biting midge Culicoides imicola is a major vector of orbiviruses to livestock. Historically, the distribution of this species was limited to the Afrotropical region. Entomological surveys first revealed the presence of C. imicola in the south of the Mediterranean basin by the 1970s. Following recurrent reports of massive bluetongue outbreaks since the 1990s, the presence of the species was confirmed in northern areas. In this study, we addressed the chronology and processes of C. imicola colonization in the Mediterranean basin. We characterized the genetic structure of its populations across Mediterranean and African regions using both mitochondrial and nuclear markers, and combined phylogeographical analyses with population genetics and approximate Bayesian computation. We found a west/east genetic differentiation between populations, occurring both within Africa and within the Mediterranean basin. We demonstrated that three of these groups had experienced demographic expansions in the Pleistocene, probably because of climate changes during this period. Finally, we showed that C. imicola could have colonized the Mediterranean basin in the Late Pleistocene or Early Holocene through a single event of introduction; however, we cannot exclude the hypothesis involving two routes of colonization. Thus, the recent bluetongue outbreaks are not linked to C. imicola colonization event, but rather to biological changes in the vector or the virus.

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    Molecular Ecology
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    Molecular Ecology
    Other literature type . Article . 2015 . Peer-reviewed
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    Authors: Josef, Noam; Mann, Ofri; Sykes, António V.; Fiorito, Graziano; +3 Authors

    Studies concerning the perceptual processes of animals are not only interesting, but are fundamental to the understanding of other developments in information processing among non-humans. Carefully used visual illusions have been proven to be an informative tool for understanding visual perception. In this behavioral study, we demonstrate that cuttlefish are responsive to visual cues involving texture gradients. Specifically, 12 out of 14 animals avoided swimming over a solid surface with a gradient picture that to humans resembles an illusionary crevasse, while only 5 out of 14 avoided a non-illusionary texture. Since texture gradients are well-known cues for depth perception in vertebrates, we suggest that these cephalopods were responding to the depth illusion created by the texture density gradient. Density gradients and relative densities are key features in distance perception in vertebrates. Our results suggest that they are fundamental features of vision in general, appearing also in cephalopods. info:eu-repo/semantics/publishedVersion

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    Animal Cognition
    Article . 2014
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      Animal Cognition
      Article . 2014
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    Authors: Moore, C.; Mills, M.; Arrigo, K.; Berman-Frank, I.; +19 Authors

    Microbial activity is a fundamental component of oceanic nutrient cycles. Photosynthetic microbes, collectively termed phytoplankton, are responsible for the vast majority of primary production in marine waters. The availability of nutrients in the upper ocean frequently limits the activity and abundance of these organisms. Experimental data have revealed two broad regimes of phytoplankton nutrient limitation in the modern upper ocean. Nitrogen availability tends to limit productivity throughout much of the surface low-latitude ocean, where the supply of nutrients from the subsurface is relatively slow. In contrast, iron often limits productivity where subsurface nutrient supply is enhanced, including within the main oceanic upwelling regions of the Southern Ocean and the eastern equatorial Pacific. Phosphorus, vitamins and micronutrients other than iron may also (co-)limit marine phytoplankton. The spatial patterns and importance of co-limitation, however, remain unclear. Variability in the stoichiometries of nutrient supply and biological demand are key determinants of oceanic nutrient limitation. Deciphering the mechanisms that underpin this variability, and the consequences for marine microbes, will be a challenge. But such knowledge will be crucial for accurately predicting the consequences of ongoing anthropogenic perturbations to oceanic nutrient biogeochemistry. © 2013 Macmillan Publishers Limited. All rights reserved.

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    Oskar Bordeaux
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    Nature Geoscience
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    Nature Geoscience
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    Article . 2013
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      Nature Geoscience
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    Authors: Rosalie Fuchs; Christel Pinazo; Pascal Douillet; Marion Fraysse; +3 Authors

    International audience; Since 2005, wind-driven 'sporadic' coastal upwelling events have been identified off the southwestern reef of New Caledonia. Several studies have described the main physical processes and induced surface patterns using 1D and 3D modelling, as well as in situ measurements. Previous models were applied at the mesoscale without taking into account the lagoon. Using a recently developed 3D coupled physical-biogeochemical model that considers the complex ocean-lagoon interface, we aim to understand better the impact of the upwelling on the lagoon. The model was found to be in good agreement with measured data reported in previous publications about two upwelling events. However, in general, levels of surface chlorophyll-a were overestimated by the model in the upwelling area when compared to ocean colour data and several hypotheses have been proposed to explain the discrepancy. We then tracked rich upwelled water using a forward Lagrangian transport analysis. Upwelled waters from the upper nutricline were found to be able to reach the South West lagoon. An anti-cyclonic eddy was detected near the upwelling area, potentially responsible, in part, for the rich water intrusions into the lagoon.

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    Other literature type . 2013
    Estuarine Coastal and Shelf Science
    Article . 2013 . Peer-reviewed
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    Authors: Chia-Te Chien; Tal Benaltabet; Adi Torfstein; Adina Paytan;

    Lead concentrations [Pb] and isotope ratios (Pb-206/Pb-207, Pb-208/Pb-207) have been measured in samples of total suspended particulate (TSP) aerosols, seawater, and suspended and sinking particles in the Gulf of Aqaba (GOA), Red Sea. Isotope ratios of Pb in seawater and in the soluble fraction of Pb in atmospheric TSP were similar suggesting that TSP is an important source of Pb in this area. Pb concentrations in seawater measured in this study (max 76.8 pmol kg(-1)) were much lower than those recorded at the same location in 2003-2004 (up to 1000 pmol kg(-1)). Changes in Pb isotope ratios in TSP depositions in these years indicate that leaded gasoline was responsible for the high dissolved Pb in GOA more than a decade ago and that recent regulation reduced Pb contamination. The similarity in Pb isotope ratios in suspended and sinking particles implies close interactions between these two size fractions. This study demonstrates the effect of the phasing out of leaded gasoline on TSP and seawater Pb chemistry in the Northern GOA; the rate of change in dissolved Pb concentrations in the GOA is faster than that reported for the open ocean possibly due to higher particle scavenging and the relatively short residence time of deep water in the Basin.

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    Environmental Science & Technology
    Article . 2019 . Peer-reviewed
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      Environmental Science & Technology
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    Developed decades ago for spatial choice problems related to zoning in the urban planning field, multicriteria analysis (MCA) has more recently been applied to environmental conflicts and presented in several documented cases for the creation of protected area management plans. Its application is considered here for the development of zoning as part of a proposed marine protected area management plan. The case study incorporates specially-explicit conservation features while considering stakeholder preferences, expert opinion and characteristics of data quality. It involves the weighting of criteria using a modified analytical hierarchy process. Experts ranked physical attributes which include socio-economically valued physical features. The parameters used for the ranking of (physical) attributes important for socio-economic reasons are derived from the field of ecosystem services assessment. Inclusion of these feature values results in protection that emphasizes those areas closest to shore, most likely because of accessibility and familiarity parameters and because of data biases. Therefore, other spatial conservation prioritization methods should be considered to supplement the MCA and efforts should be made to improve data about ecosystem service values farther from shore. Otherwise, the MCA method allows incorporation of expert and stakeholder preferences and ecosystem services values while maintaining the advantages of simplicity and clarity.

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    PLoS ONE; OpenAPC Global Initiative
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    Authors: Gülşen Timur; Çiğdem Ürkü;

    This study was carried out to detect Lactococcus garvieae from experimentally infected rainbow trout (Oncorhynchus mykiss, W.) using bacteriological, serological, and histopathological techniques. Rainbow trout were experimentally infected with two Lactococcus garvieae strains (L1 and L2) by intraperitonal injection. These strains caused bilateral exophthalmia with periocular hemorrhage, corneal opacification, darkening of the skin, strong internal congestion in the visceral organs, and enlargement of the spleen in the infected rainbow trout. The two L. garvieae strains were re-isolated from experimentally infected fish groups and identified with standard biochemical methods and API 20 STREP system. The presence of L. garvieae in the tissue of experimentally infected fish was confirmed by Indirect Fluorescent Antibody Technique (IFAT). The humoral antibody response of the infected fish was confirmed by slide agglutination, IFAT, and Enzyme Linked Immunosorbent Assay (ELISA). Histopathologically, liquefactive necrosis in the liver, spleen, and kidney, epithelial cells hyperplasia, hemorrhages and telangiectasia of the gill filaments, and sub-retinal hemorrhages in the eyes were observed.

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    Israeli Journal of Aquaculture - Bamidgeh
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    Israeli Journal of Aquaculture - Bamidgeh
    Article . 2014 . Peer-reviewed
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      Israeli Journal of Aquaculture - Bamidgeh
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      Israeli Journal of Aquaculture - Bamidgeh
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    Authors: Jiarui Liu; André Pellerin; Gilad Antler; Gareth Izon; +6 Authors

    Sediment-hosted marine sulfur cycling has played a significant role in regulating Earth's surface chemistry over our planet's history. Microbially-mediated reactions involving sulfur are often accompanied by sulfur isotope fractionation that, in turn, is captured by sulfate and sulfide minerals, providing the opportunity to track changes in the microbial utilization of sulfur and thus the marine sulfur cycle. Studying sulfur diagenesis within the Bornholm Basin, Baltic Sea, we explore the interplay between carbon, sulfur and iron, focusing on the fate of sulfur and the dynamics of the sulfur and oxygen isotopic response as a function of the varying thickness of the organic carbon-rich Holocene Mud Layer (HML) across the basin. Using a one-dimensional reaction-transport model, porewater sulfate and sulfide profiles were used to calculate net sulfate reduction rates (SRR) and net sulfide production rates, respectively. These calculations suggest a positive relationship between the thickness of the HML and net rates of sulfate reduction and sulfide production. Given that ascending sulfide is enriched in 34S relative to that produced in-situ, a heightened sulfide flux promotes spatially variable precipitation of 34S-enriched pyrite (δ34S ≈ −10‰) close to the sediment–water interface. Modeling results indicate that this isotopically “heavy” sulfide is formed as a consequence of mixing between ascending sulfide (up to +6.3‰) and that produced in-situ (ca. −40‰). Further, we show that the sulfur and oxygen isotopic composition of porewater sulfate is controlled by the net SRR: when the net SRR is high (i.e., in sulfide-replete settings) the downcore increase in δ18OSO4 is dampened relative to increase in δ34SSO4, whereas when net SRR is low (i.e., in iron-rich parts of the basin) downcore δ18OSO4 values increase while δ34SSO4 values remain invariant. We conclude that sedimentation rates and open system diffusion strongly influence the distribution of sulfur species and their sulfur isotopic composition, as well as the oxygen isotopic composition of sulfate, through the interaction between iron, sulfur and methane. This work highlights the importance of considering diffusion to better understand open system diagenesis and the δ34S signatures of sulfate and sulfide in both modern settings and ancient rocks.

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    The depth distribution of reef-building corals exposes their photosynthetic symbionts of the genus Symbiodinium to extreme gradients in the intensity and spectral quality of the ambient light environment. Characterizing the mechanisms used by the coral holobiont to respond to the low intensity and reduced spectral composition of the light environment in deeper reefs (greater than 20 m) is fundamental to our understanding of the functioning and structure of reefs across depth gradients. Here, we demonstrate that host pigments, specifically photoconvertible red fluorescent proteins (pcRFPs), can promote coral adaptation/acclimatization to deeper-water light environments by transforming the prevalent blue light into orange-red light, which can penetrate deeper within zooxanthellae-containing tissues; this facilitates a more homogeneous distribution of photons across symbiont communities. The ecological importance of pcRFPs in deeper reefs is supported by the increasing proportion of red fluorescent corals with depth (measured down to 45 m) and increased survival of colour morphs with strong expression of pcRFPs in long-term light manipulation experiments. In addition to screening by host pigments from high light intensities in shallow water, the spectral transformation observed in deeper-water corals highlights the importance of GFP-like protein expression as an ecological mechanism to support the functioning of the coral– Symbiodinium association across steep environmental gradients.

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    Proceedings of the Royal Society B Biological Sciences; OpenAPC Global Initiative
    Article . Conference object . 2017 . Peer-reviewed
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      Proceedings of the Royal Society B Biological Sciences; OpenAPC Global Initiative
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    Authors: Assaf Yasur-Landau; Gilad Shtienberg; Gil Gambash; Giorgio Spada; +6 Authors

    This article presents new archaeological observations and multidisciplinary research from Dor, Israel to establish a more reliable relative sea level for the Carmel Coast and Southern Levant between the Middle Bronze Age and the Roman period (ca. 3500–1800 y BP). Our record indicates a period of low relative sea level, around -2.5 m below present, from the Middle Bronze Age to the Hellenistic period (ca. 3500–2200 y BP). This was followed by a rapid rise to present levels, starting in the Hellenistic period and concluding during the Roman period (ca. 2200–1800 y BP). These Roman levels agree with other relative sea-level indications from Israel and other tectonically stable areas in the Mediterranean. Several relative sea-level reconstruction models carried out in the current study provide different predictions due to their parameters and do not model the changes observed from field data which points to a non-isostatic origin for the changes. Long-term low stable Iron Age relative sea level can be seen in Dor, where Iron Age harbor structures remain around the same elevation between ca. 3100–2700 y BP. A similar pattern occurs at Atlit, the Iron Age harbor to the north used continuously from ca. 2900 y BP to the beginning of the Hellenistic period (ca. 2200 y BP). An examination of historical and archaeological sources reveals decline and occasional disappearance of Hellenistic sites along the coast of Israel at ca. 2200 y BP (2ndcentury BCE), as in the case of Yavneh Yam, Ashdod Yam, Straton’s Tower, and tel Taninim. In Akko-Ptolemais, the large harbor installations built in the Hellenistic period were never replaced by a substantial Roman harbor. The conclusions of this research are thus relevant for the sea-level research community and for the historical analyses of the Israeli and South Levantine coastline.

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    PLoS ONE
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    DOAJ; PLoS ONE
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      PLoS ONE
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      PLoS ONE
      Article . 2021 . Peer-reviewed
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      DOAJ; PLoS ONE
      Article . 2021
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    Authors: Stéphanie Jacquet; Claire Garros; Eric Lombaert; Catherine Walton; +36 Authors

    AbstractUnderstanding the demographic history and genetic make‐up of colonizing species is critical for inferring population sources and colonization routes. This is of main interest for designing accurate control measures in areas newly colonized by vector species of economically important pathogens. The biting midge Culicoides imicola is a major vector of orbiviruses to livestock. Historically, the distribution of this species was limited to the Afrotropical region. Entomological surveys first revealed the presence of C. imicola in the south of the Mediterranean basin by the 1970s. Following recurrent reports of massive bluetongue outbreaks since the 1990s, the presence of the species was confirmed in northern areas. In this study, we addressed the chronology and processes of C. imicola colonization in the Mediterranean basin. We characterized the genetic structure of its populations across Mediterranean and African regions using both mitochondrial and nuclear markers, and combined phylogeographical analyses with population genetics and approximate Bayesian computation. We found a west/east genetic differentiation between populations, occurring both within Africa and within the Mediterranean basin. We demonstrated that three of these groups had experienced demographic expansions in the Pleistocene, probably because of climate changes during this period. Finally, we showed that C. imicola could have colonized the Mediterranean basin in the Late Pleistocene or Early Holocene through a single event of introduction; however, we cannot exclude the hypothesis involving two routes of colonization. Thus, the recent bluetongue outbreaks are not linked to C. imicola colonization event, but rather to biological changes in the vector or the virus.

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    Molecular Ecology
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    Molecular Ecology
    Other literature type . Article . 2015 . Peer-reviewed
    License: Wiley Online Library User Agreement
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    Authors: Josef, Noam; Mann, Ofri; Sykes, António V.; Fiorito, Graziano; +3 Authors

    Studies concerning the perceptual processes of animals are not only interesting, but are fundamental to the understanding of other developments in information processing among non-humans. Carefully used visual illusions have been proven to be an informative tool for understanding visual perception. In this behavioral study, we demonstrate that cuttlefish are responsive to visual cues involving texture gradients. Specifically, 12 out of 14 animals avoided swimming over a solid surface with a gradient picture that to humans resembles an illusionary crevasse, while only 5 out of 14 avoided a non-illusionary texture. Since texture gradients are well-known cues for depth perception in vertebrates, we suggest that these cephalopods were responding to the depth illusion created by the texture density gradient. Density gradients and relative densities are key features in distance perception in vertebrates. Our results suggest that they are fundamental features of vision in general, appearing also in cephalopods. info:eu-repo/semantics/publishedVersion

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    Animal Cognition
    Article . 2014
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      Animal Cognition
      Article . 2014
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    Authors: Moore, C.; Mills, M.; Arrigo, K.; Berman-Frank, I.; +19 Authors

    Microbial activity is a fundamental component of oceanic nutrient cycles. Photosynthetic microbes, collectively termed phytoplankton, are responsible for the vast majority of primary production in marine waters. The availability of nutrients in the upper ocean frequently limits the activity and abundance of these organisms. Experimental data have revealed two broad regimes of phytoplankton nutrient limitation in the modern upper ocean. Nitrogen availability tends to limit productivity throughout much of the surface low-latitude ocean, where the supply of nutrients from the subsurface is relatively slow. In contrast, iron often limits productivity where subsurface nutrient supply is enhanced, including within the main oceanic upwelling regions of the Southern Ocean and the eastern equatorial Pacific. Phosphorus, vitamins and micronutrients other than iron may also (co-)limit marine phytoplankton. The spatial patterns and importance of co-limitation, however, remain unclear. Variability in the stoichiometries of nutrient supply and biological demand are key determinants of oceanic nutrient limitation. Deciphering the mechanisms that underpin this variability, and the consequences for marine microbes, will be a challenge. But such knowledge will be crucial for accurately predicting the consequences of ongoing anthropogenic perturbations to oceanic nutrient biogeochemistry. © 2013 Macmillan Publishers Limited. All rights reserved.

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    Oskar Bordeaux
    Article . 2013
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    Nature Geoscience
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    Nature Geoscience
    Article . 2013 . Peer-reviewed
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    Other literature type . 2013
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    Hal-Diderot
    Article . 2013
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      Nature Geoscience
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      Other literature type . 2013
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      Hal-Diderot
      Article . 2013
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