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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Alina Fiehn; Birgit Quack; Irene Stemmler; Franziska Ziska; +1 Authors

    Oceanic very short-lived substances (VSLSs), such as bromoform (CHBr3), contribute to stratospheric halogen loading and, thus, to ozone depletion. However, the amount, timing, and region of bromine delivery to the stratosphere through one of the main entrance gates, the Indian summer monsoon circulation, are still uncertain. In this study, we created two bromoform emission inventories with monthly resolution for the tropical Indian Ocean and west Pacific based on new in situ bromoform measurements and novel ocean biogeochemistry modeling. The mass transport and atmospheric mixing ratios of bromoform were modeled for the year 2014 with the particle dispersion model FLEXPART driven by ERA-Interim reanalysis. We compare results between two emission scenarios: (1) monthly averaged and (2) annually averaged emissions. Both simulations reproduce the atmospheric distribution of bromoform from ship- and aircraft-based observations in the boundary layer and upper troposphere above the Indian Ocean reasonably well. Using monthly resolved emissions, the main oceanic source regions for the stratosphere include the Arabian Sea and Bay of Bengal in boreal summer and the tropical west Pacific Ocean in boreal winter. The main stratospheric injection in boreal summer occurs over the southern tip of India associated with the high local oceanic sources and strong convection of the summer monsoon. In boreal winter more bromoform is entrained over the west Pacific than over the Indian Ocean. The annually averaged stratospheric injection of bromoform is in the same range whether using monthly averaged or annually averaged emissions in our Lagrangian calculations. However, monthly averaged emissions result in the highest mixing ratios within the Asian monsoon anticyclone in boreal summer and above the central Indian Ocean in boreal winter, while annually averaged emissions display a maximum above the west Indian Ocean in boreal spring. In the Asian summer monsoon anticyclone bromoform atmospheric mixing ratios vary by up to 50 % between using monthly averaged and annually averaged oceanic emissions. Our results underline that the seasonal and regional stratospheric bromine injection from the tropical Indian Ocean and west Pacific critically depend on the seasonality and spatial distribution of the VSLS emissions.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Norwegian Open Resea...arrow_drop_down
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    OceanRep
    Article . 2018 . Peer-reviewed
    Data sources: OceanRep
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    DOAJ
    Article . 2018
    Data sources: DOAJ
    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
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    Atmospheric Chemistry and Physics (ACP)
    Article . 2018 . Peer-reviewed
    License: CC BY
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    MPG.PuRe
    Article . 2018
    License: CC BY
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    MPG.PuRe
    Article . 2018
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    Atmospheric Chemistry and Physics (ACP)
    Article . Preprint
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    https://doi.org/10.5194/acp-20...
    Preprint . 2018
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    Copernicus Publications
    Other literature type . 2019
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Norwegian Open Resea...arrow_drop_down
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      OceanRep
      Article . 2018 . Peer-reviewed
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      DOAJ
      Article . 2018
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      Atmospheric Chemistry and Physics (ACP)
      Article . 2018 . Peer-reviewed
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      MPG.PuRe
      Article . 2018
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      MPG.PuRe
      Article . 2018
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Atmospheric Chemistry and Physics (ACP)
      Article . Preprint
      License: CC BY
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      https://doi.org/10.5194/acp-20...
      Preprint . 2018
      License: CC BY
      Data sources: Crossref
      Copernicus Publications
      Other literature type . 2019
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Polyakov, Igor; Walsh, David; Dmitrenko, Igor; Colony, Roger L.; +1 Authors

    This study has been motivated by reports of extraordinary change in the Arctic Ocean observed in recent decades. Most of these observations are based on synoptic measurements, while evaluation of anomalies requires an understanding of the underlying long‐term variability. Historical climatologies give reference means, and while these datasets are a reliable source of the mean Atlantic Layer temperature, they significantly underestimate variability. Using historical data, we calculated statistical parameters for selected Arctic Ocean regions. They demonstrate a high level of Atlantic Layer temperature variability in the Nansen Basin and sea‐surface salinity fluctuations on the Siberian shelf and the Amundsen Basin. These estimates suggest strong limitations on our ability to define amplitudes of anomalies by comparing recent synoptic measurements with climatologies, especially for regions characterized by strong variability.

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ OceanReparrow_drop_down
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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Geophysical Research Letters
    Article . 2003 . Peer-reviewed
    License: Wiley Online Library User Agreement
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      Geophysical Research Letters
      Article . 2003 . Peer-reviewed
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    Authors: Jeffrey A. Hawkes; Pamela E. Rossel; Aron Stubbins; David A. Butterfield; +7 Authors

    Oceanic dissolved organic carbon (DOC) is an important carbon pool, similar in magnitude to atmospheric CO2, but the fate of its oldest forms is not well understood1, 2. Hot hydrothermal circulation may facilitate the degradation of otherwise un-reactive dissolved organic matter, playing an important role in the long-term global carbon cycle. The oldest, most recalcitrant forms of DOC, which make up most of oceanic DOC, can be recovered by solid-phase extraction. Here we present measurements of solid-phase extractable DOC from samples collected between 2009 and 2013 at seven vent sites in the Atlantic, Pacific and Southern oceans, along with magnesium concentrations, a conservative tracer of water circulation through hydrothermal systems. We find that magnesium and solid-phase extractable DOC concentrations are correlated, suggesting that solid-phase extractable DOC is almost entirely lost from solution through mineralization or deposition during circulation through hydrothermal vents with fluid temperatures of 212–401 °C. In laboratory experiments, where we heated samples to 380 °C for four days, we found a similar removal efficiency. We conclude that thermal degradation alone can account for the loss of solid-phase extractable DOC in natural hydrothermal systems, and that its maximum lifetime is constrained by the timescale of hydrothermal cycling, at about 40 million years3.

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    Nature Geoscience
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    Authors: Khripounoff, Alexis; Vangriesheim, Annick; Crassous, Philippe; Etoubleau, Joel;

    This study aimed to analyze the role river floods play in triggering gravity flows and to investigate the role of submarine canyon systems as a conduit for terrigenous material to the deep sea. Two years of measurements in the Var canyon at depths ranging from 1200 m to 2350 m indicate that six floods of the Var River triggered hyperpycnal flows, an important mechanism for transporting particulate matter to the deep-sea floor. These sediment gravity flows were characterized by a sudden increase of current velocity that lasted 8 to 22 h and by downward particle fluxes that reached up to 600 g m(-2)d(-1) of particles and 3.1 g m(-2)d(-1) in terms of organic carbon. These large inputs of sediment and organic carbon may have a significant impact on deep-sea ecosystems and carbon storage in the Mediterranean Sea.

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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Marine Geology
    Article . 2009 . Peer-reviewed
    License: Elsevier TDM
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Marine Geology; Arch...arrow_drop_down
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      Marine Geology
      Article . 2009 . Peer-reviewed
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    Authors: Lefebvre, A.; Poisson Caillault, Emilie;

    International audience; As we move towards shipboard-underway and automated systems for monitoring water quality and assessing ecological status, there is a need to evaluate how effective the existing monitoring systems are, and how we could improve them. Considering the existing limitations for processing numerous and complex data series generated from automated systems, and because of processes involved in phytoplankton blooms, this paper proposes a data-driven evaluation of an unsupervised classifier to optimize the way we track phytoplankton, including harmful algal blooms (HABs), and to identify the main associated hydrological conditions. We used in situ data from a portable flow-through automatic measuring system coupled with a multi-fixed-wavelength fluorometer implemented in the eastern English Channel during a bloom of Phaeocystis globosa (high biomass, non-toxic HAB species). This combination of technologies allowed high resolution online hydrographical and biological measurements, including spectral fluorescence as a means of quantifying phytoplankton biomass and simplifying the phytoplankton community structure inference. An unsupervised spectral clustering method was applied to this multi-parameter high-resolution time series, which allowed discrimination under near real-time of 6 to 33 contrasting water masses based on their abiotic and biotic characteristics. In addition, areas subject to extreme events such as HABs could be precisely identified, so controlling factors or their direct and indirect effects could be hierarchized. Considering the benefits and limitations of such a strategy, future applications of such methods will be important in the context of implementing the Marine Strategy Framework Directive.

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    Authors: Peng Jin; Tifeng Wang; Nana Liu; Sam Dupont; +4 Authors

    Increasing atmospheric CO2 concentrations are causing ocean acidification (OA), altering carbonate chemistry with consequences for marine organisms. Here we show that OA increases by 46–212% the production of phenolic compounds in phytoplankton grown under the elevated CO2 concentrations projected for the end of this century, compared with the ambient CO2 level. At the same time, mitochondrial respiration rate is enhanced under elevated CO2 concentrations by 130–160% in a single species or mixed phytoplankton assemblage. When fed with phytoplankton cells grown under OA, zooplankton assemblages have significantly higher phenolic compound content, by about 28–48%. The functional consequences of the increased accumulation of toxic phenolic compounds in primary and secondary producers have the potential to have profound consequences for marine ecosystem and seafood quality, with the possibility that fishery industries could be influenced as a result of progressive ocean changes. Increasing atmospheric CO2 concentrations causes ocean acidification, which alters marine chemical environments with unknown consequences for marine ecosystems. Here, Gao et al. show that ocean acidification increases levels of phenolic compounds in phytoplankton and zooplankton, implying a food chain impact.

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    OceanRep
    Article . 2015 . Peer-reviewed
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    Nature Communications
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    Nature Communications
    Article . 2015 . Peer-reviewed
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      OceanRep
      Article . 2015 . Peer-reviewed
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      Nature Communications
      Article . 2015 . Peer-reviewed
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    Authors: Tony Gardon; Céline M. O. Reisser; Claude Soyez; Virgile Quillien; +1 Authors

    Plastic pollution in the environment is increasing at global scale. Microplastics (MP) are derived from degradation of larger plastic items or directly produced in microparticles form (<5 mm). Plastics, widely used in structures and equipments of pearl farming, are a source of pollution to the detriment of the lagoon ecosystem. In order to evaluate the impact of MP on the physiology of Pinctada margaritifera, a species of ecological and commercial interests, adult oysters were exposed to polystyrene microbeads (micro-PS of 6 and 10 μm) for 2 months. Three concentrations were tested: 0.25, 2.5, 25 μg L-1 and a control. Ingestion and respiration rate and assimilation efficiency were monitored on a metabolic measurement system to determine the individual energy balance (Scope For Growth, SFG). Effects on reproduction were also assessed. The assimilation efficiency decreased significantly according to micro-PS concentration. The SFG was significantly impacted by a dose-dependent decrease from 0.25 μg L-1 (p < 0.0001). A negative SFG was measured in oysters exposed to 25 μg L-1. Gonads may have provided the missing energy to maintain animals’ metabolism through the production of metabolites derived from germ cells phagocytosis. This study shows that micro-PS significantly impact the assimilation efficiency and more broadly the energy balance of P. margaritifera, with negative repercussions on reproduction.

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    Environmental Science & Technology
    Article . 2018 . Peer-reviewed
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      Environmental Science & Technology
      Article . 2018 . Peer-reviewed
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    Authors: Joël Aubin; Myriam D. Callier; Hélène Rey-Valette; Syndhia Mathé; +14 Authors

    Ecological intensification is a new concept in agriculture that addresses the double challenge of maintaining a level of production sufficient to support needs of human populations and respecting the environment in order to conserve the natural world and human quality of life. This article adapts this concept to fish farming using agroecological principles and the ecosystem services framework. The method was developed from the study of published literature and applications at four study sites chosen for their differences in production intensity: polyculture ponds in France, integrated pig and pond polyculture in Brazil, the culture of striped catfish in Indonesia and a recirculating salmon aquaculture system in France. The study of stakeholders' perceptions of ecosystem services combined with environmental assessment through Life Cycle Assessment and Emergy accounting allowed development of an assessment tool that was used as a basis for co-building evolution scenarios. From this experience, ecological intensifica-tion of aquaculture was defined as the use of ecological processes and functions to increase productivity, strengthen ecosystem services and decrease disservices. It is based on aquaecosystem and biodiversity management and the use of local and traditional knowledge. Expected consequences for farming systems consist of greater autonomy, efficiency and better integration into their surrounding territories. Ecological intensification requires territorial governance and helps improve it from a sustainable development perspective. International audience

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    Horizon / Pleins textes
    Other literature type . 2019
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    Reviews in Aquaculture
    Article . 2017 . Peer-reviewed
    License: Wiley Online Library User Agreement
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    Agritrop
    Article . 2019
    Data sources: Agritrop
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    Authors: X. Wen; X. Wen; V. Unger; G. Jurasinski; +15 Authors

    The rewetting of drained peatlands alters peat geochemistry and often leads to sustained elevated methane emission. Although this methane is produced entirely by microbial activity, the distribution and abundance of methane-cycling microbes in rewetted peatlands, especially in fens, is rarely described. In this study, we compare the community composition and abundance of methane-cycling microbes in relation to peat porewater geochemistry in two rewetted fens in northeastern Germany, a coastal brackish fen and a freshwater riparian fen, with known high methane fluxes. We utilized 16S rRNA high-throughput sequencing and quantitative polymerase chain reaction (qPCR) on 16S rRNA, mcrA, and pmoA genes to determine microbial community composition and the abundance of total bacteria, methanogens, and methanotrophs. Electrical conductivity (EC) was more than 3 times higher in the coastal fen than in the riparian fen, averaging 5.3 and 1.5 mS cm−1, respectively. Porewater concentrations of terminal electron acceptors (TEAs) varied within and among the fens. This was also reflected in similarly high intra- and inter-site variations of microbial community composition. Despite these differences in environmental conditions and electron acceptor availability, we found a low abundance of methanotrophs and a high abundance of methanogens, represented in particular by Methanosaetaceae, in both fens. This suggests that rapid (re)establishment of methanogens and slow (re)establishment of methanotrophs contributes to prolonged increased methane emissions following rewetting.

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    DOAJ
    Article . 2018
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    Biogeosciences
    Article
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    Biogeosciences
    Article . 2018 . Peer-reviewed
    License: CC BY
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    Biogeosciences (BG)
    Other literature type . 2019
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    Biogeosciences
    Article . 2018
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    Copernicus Publications
    Other literature type . 2019
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      DOAJ
      Article . 2018
      Data sources: DOAJ
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      Biogeosciences
      Article
      License: CC BY
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      Biogeosciences
      Article . 2018 . Peer-reviewed
      License: CC BY
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      Biogeosciences (BG)
      Other literature type . 2019
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      Biogeosciences
      Article . 2018
      Data sources: DOAJ-Articles
      image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
      Copernicus Publications
      Other literature type . 2019
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    Authors: Lafond, Augustin; Leblanc, Karine; Legras, Justine; Cornet, Veronique; +1 Authors

    In the context of climate change, understanding the ecological processes controlling the functioning and the efficiency of the biological pump is of primary importance. Plankton community structure and species-specific properties are often invoked as likely to affect biogeochemistry and the export of organic and biogenic mate- rial to the ocean interior. Although a major player in this respect, diatoms are still viewed as a single functional type whose diversity is generally overlooked. Here we examine that question, building on the results achieved during the MOBYDICK expedition, which occurred in the vicinity of the Kerguelen Islands (Southern Ocean) in late summer, a time window corresponding to the demise of the annually recurrent phytoplankton blooms already known to be controlled by iron availability. The Si/C/N stoichiometry of the particulate matter was studied in conjunction with the different diatom community structures, their physiological states, as well as their species-specific carbon contents and silicification degrees. Our results show that diatoms outside the iron- fertilized plateau were more heavily silicified, due to the combined effects of both taxonomic composition of the resident community and a direct physiological response to iron stress, resulting in higher Si:C elemental ratios in diatoms as well as in the bulk particulate matter. Despite low silicic acid concentrations, large chains of weakly silicified Corethron inerme were able to grow in the upper mixed layer above the plateau, while in adjacent high nutrient low chlorophyll (HNLC) waters, communities were dominated by Fragilariopsis spp., Cylindrotheca closterium and the centric genera Actinocyclus/Thalassiosira spp. Depth was also an important factor shaping diatom communities, with the presence of a deep and inactive assemblage located within the pycnocline gradient, both on- and off-plateau, which likely resulted from the differential sinking and accumulation of species previously grown at the surface. In HNLC waters, below the mixed layer, detrital frustules of the heavily silicified species Fragilariopsis kerguelensis carried mostly Si, while above the plateau, Eucampia antarctica and Chaetoceros spp. (resting spores and vegetative stages) were efficient vectors of both Si and C to the deeper layers. Our study shows that the stoichiometry of the biological pump cannot be considered solely as a simple response to a single limiting factor (here iron) highlighting the importance of a species-centered approach in order to finely resolve biogeochemical fluxes and improve our understanding of the biological pump. International audience

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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Journal of Marine Systems
    Article . 2020 . Peer-reviewed
    License: Elsevier TDM
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Alina Fiehn; Birgit Quack; Irene Stemmler; Franziska Ziska; +1 Authors

    Oceanic very short-lived substances (VSLSs), such as bromoform (CHBr3), contribute to stratospheric halogen loading and, thus, to ozone depletion. However, the amount, timing, and region of bromine delivery to the stratosphere through one of the main entrance gates, the Indian summer monsoon circulation, are still uncertain. In this study, we created two bromoform emission inventories with monthly resolution for the tropical Indian Ocean and west Pacific based on new in situ bromoform measurements and novel ocean biogeochemistry modeling. The mass transport and atmospheric mixing ratios of bromoform were modeled for the year 2014 with the particle dispersion model FLEXPART driven by ERA-Interim reanalysis. We compare results between two emission scenarios: (1) monthly averaged and (2) annually averaged emissions. Both simulations reproduce the atmospheric distribution of bromoform from ship- and aircraft-based observations in the boundary layer and upper troposphere above the Indian Ocean reasonably well. Using monthly resolved emissions, the main oceanic source regions for the stratosphere include the Arabian Sea and Bay of Bengal in boreal summer and the tropical west Pacific Ocean in boreal winter. The main stratospheric injection in boreal summer occurs over the southern tip of India associated with the high local oceanic sources and strong convection of the summer monsoon. In boreal winter more bromoform is entrained over the west Pacific than over the Indian Ocean. The annually averaged stratospheric injection of bromoform is in the same range whether using monthly averaged or annually averaged emissions in our Lagrangian calculations. However, monthly averaged emissions result in the highest mixing ratios within the Asian monsoon anticyclone in boreal summer and above the central Indian Ocean in boreal winter, while annually averaged emissions display a maximum above the west Indian Ocean in boreal spring. In the Asian summer monsoon anticyclone bromoform atmospheric mixing ratios vary by up to 50 % between using monthly averaged and annually averaged oceanic emissions. Our results underline that the seasonal and regional stratospheric bromine injection from the tropical Indian Ocean and west Pacific critically depend on the seasonality and spatial distribution of the VSLS emissions.

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    OceanRep
    Article . 2018 . Peer-reviewed
    Data sources: OceanRep
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    DOAJ
    Article . 2018
    Data sources: DOAJ
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    Atmospheric Chemistry and Physics (ACP)
    Article . 2018 . Peer-reviewed
    License: CC BY
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    MPG.PuRe
    Article . 2018
    License: CC BY
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    MPG.PuRe
    Article . 2018
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    Atmospheric Chemistry and Physics (ACP)
    Article . Preprint
    License: CC BY
    Data sources: UnpayWall
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    https://doi.org/10.5194/acp-20...
    Preprint . 2018
    License: CC BY
    Data sources: Crossref
    Copernicus Publications
    Other literature type . 2019
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Norwegian Open Resea...arrow_drop_down
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      OceanRep
      Article . 2018 . Peer-reviewed
      Data sources: OceanRep
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      DOAJ
      Article . 2018
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      image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
      Atmospheric Chemistry and Physics (ACP)
      Article . 2018 . Peer-reviewed
      License: CC BY
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      MPG.PuRe
      Article . 2018
      License: CC BY
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      MPG.PuRe
      Article . 2018
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      Atmospheric Chemistry and Physics (ACP)
      Article . Preprint
      License: CC BY
      Data sources: UnpayWall
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      https://doi.org/10.5194/acp-20...
      Preprint . 2018
      License: CC BY
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      Copernicus Publications
      Other literature type . 2019
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    Authors: Polyakov, Igor; Walsh, David; Dmitrenko, Igor; Colony, Roger L.; +1 Authors

    This study has been motivated by reports of extraordinary change in the Arctic Ocean observed in recent decades. Most of these observations are based on synoptic measurements, while evaluation of anomalies requires an understanding of the underlying long‐term variability. Historical climatologies give reference means, and while these datasets are a reliable source of the mean Atlantic Layer temperature, they significantly underestimate variability. Using historical data, we calculated statistical parameters for selected Arctic Ocean regions. They demonstrate a high level of Atlantic Layer temperature variability in the Nansen Basin and sea‐surface salinity fluctuations on the Siberian shelf and the Amundsen Basin. These estimates suggest strong limitations on our ability to define amplitudes of anomalies by comparing recent synoptic measurements with climatologies, especially for regions characterized by strong variability.

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    image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
    Geophysical Research Letters
    Article . 2003 . Peer-reviewed
    License: Wiley Online Library User Agreement
    Data sources: Crossref
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      Geophysical Research Letters
      Article . 2003 . Peer-reviewed
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    Authors: Jeffrey A. Hawkes; Pamela E. Rossel; Aron Stubbins; David A. Butterfield; +7 Authors

    Oceanic dissolved organic carbon (DOC) is an important carbon pool, similar in magnitude to atmospheric CO2, but the fate of its oldest forms is not well understood1, 2. Hot hydrothermal circulation may facilitate the degradation of otherwise un-reactive dissolved organic matter, playing an important role in the long-term global carbon cycle. The oldest, most recalcitrant forms of DOC, which make up most of oceanic DOC, can be recovered by solid-phase extraction. Here we present measurements of solid-phase extractable DOC from samples collected between 2009 and 2013 at seven vent sites in the Atlantic, Pacific and Southern oceans, along with magnesium concentrations, a conservative tracer of water circulation through hydrothermal systems. We find that magnesium and solid-phase extractable DOC concentrations are correlated, suggesting that solid-phase extractable DOC is almost entirely lost from solution through mineralization or deposition during circulation through hydrothermal vents with fluid temperatures of 212–401 °C. In laboratory experiments, where we heated samples to 380 °C for four days, we found a similar removal efficiency. We conclude that thermal degradation alone can account for the loss of solid-phase extractable DOC in natural hydrothermal systems, and that its maximum lifetime is constrained by the timescale of hydrothermal cycling, at about 40 million years3.

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    Authors: Khripounoff, Alexis; Vangriesheim, Annick; Crassous, Philippe; Etoubleau, Joel;

    This study aimed to analyze the role river floods play in triggering gravity flows and to investigate the role of submarine canyon systems as a conduit for terrigenous material to the deep sea. Two years of measurements in the Var canyon at depths ranging from 1200 m to 2350 m indicate that six floods of the Var River triggered hyperpycnal flows, an important mechanism for transporting particulate matter to the deep-sea floor. These sediment gravity flows were characterized by a sudden increase of current velocity that lasted 8 to 22 h and by downward particle fluxes that reached up to 600 g m(-2)d(-1) of particles and 3.1 g m(-2)d(-1) in terms of organic carbon. These large inputs of sediment and organic carbon may have a significant impact on deep-sea ecosystems and carbon storage in the Mediterranean Sea.

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    Marine Geology
    Article . 2009 . Peer-reviewed
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      Marine Geology
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    Authors: Lefebvre, A.; Poisson Caillault, Emilie;

    International audience; As we move towards shipboard-underway and automated systems for monitoring water quality and assessing ecological status, there is a need to evaluate how effective the existing monitoring systems are, and how we could improve them. Considering the existing limitations for processing numerous and complex data series generated from automated systems, and because of processes involved in phytoplankton blooms, this paper proposes a data-driven evaluation of an unsupervised classifier to optimize the way we track phytoplankton, including harmful algal blooms (HABs), and to identify the main associated hydrological conditions. We used in situ data from a portable flow-through automatic measuring system coupled with a multi-fixed-wavelength fluorometer implemented in the eastern English Channel during a bloom of Phaeocystis globosa (high biomass, non-toxic HAB species). This combination of technologies allowed high resolution online hydrographical and biological measurements, including spectral fluorescence as a means of quantifying phytoplankton biomass and simplifying the phytoplankton community structure inference. An unsupervised spectral clustering method was applied to this multi-parameter high-resolution time series, which allowed discrimination under near real-time of 6 to 33 contrasting water masses based on their abiotic and biotic characteristics. In addition, areas subject to extreme events such as HABs could be precisely identified, so controlling factors or their direct and indirect effects could be hierarchized. Considering the benefits and limitations of such a strategy, future applications of such methods will be important in the context of implementing the Marine Strategy Framework Directive.

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    Authors: Peng Jin; Tifeng Wang; Nana Liu; Sam Dupont; +4 Authors

    Increasing atmospheric CO2 concentrations are causing ocean acidification (OA), altering carbonate chemistry with consequences for marine organisms. Here we show that OA increases by 46–212% the production of phenolic compounds in phytoplankton grown under the elevated CO2 concentrations projected for the end of this century, compared with the ambient CO2 level. At the same time, mitochondrial respiration rate is enhanced under elevated CO2 concentrations by 130–160% in a single species or mixed phytoplankton assemblage. When fed with phytoplankton cells grown under OA, zooplankton assemblages have significantly higher phenolic compound content, by about 28–48%. The functional consequences of the increased accumulation of toxic phenolic compounds in primary and secondary producers have the potential to have profound consequences for marine ecosystem and seafood quality, with the possibility that fishery industries could be influenced as a result of progressive ocean changes. Increasing atmospheric CO2 concentrations causes ocean acidification, which alters marine chemical environments with unknown consequences for marine ecosystems. Here, Gao et al. show that ocean acidification increases levels of phenolic compounds in phytoplankton and zooplankton, implying a food chain impact.

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    OceanRep
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    Nature Communications
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    Nature Communications
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    Authors: Tony Gardon; Céline M. O. Reisser; Claude Soyez; Virgile Quillien; +1 Authors

    Plastic pollution in the environment is increasing at global scale. Microplastics (MP) are derived from degradation of larger plastic items or directly produced in microparticles form (<5 mm). Plastics, widely used in structures and equipments of pearl farming, are a source of pollution to the detriment of the lagoon ecosystem. In order to evaluate the impact of MP on the physiology of Pinctada margaritifera, a species of ecological and commercial interests, adult oysters were exposed to polystyrene microbeads (micro-PS of 6 and 10 μm) for 2 months. Three concentrations were tested: 0.25, 2.5, 25 μg L-1 and a control. Ingestion and respiration rate and assimilation efficiency were monitored on a metabolic measurement system to determine the individual energy balance (Scope For Growth, SFG). Effects on reproduction were also assessed. The assimilation efficiency decreased significantly according to micro-PS concentration. The SFG was significantly impacted by a dose-dependent decrease from 0.25 μg L-1 (p < 0.0001). A negative SFG was measured in oysters exposed to 25 μg L-1. Gonads may have provided the missing energy to maintain animals’ metabolism through the production of metabolites derived from germ cells phagocytosis. This study shows that micro-PS significantly impact the assimilation efficiency and more broadly the energy balance of P. margaritifera, with negative repercussions on reproduction.

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    Environmental Science & Technology
    Article . 2018 . Peer-reviewed
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    Authors: Joël Aubin; Myriam D. Callier; Hélène Rey-Valette; Syndhia Mathé; +14 Authors

    Ecological intensification is a new concept in agriculture that addresses the double challenge of maintaining a level of production sufficient to support needs of human populations and respecting the environment in order to conserve the natural world and human quality of life. This article adapts this concept to fish farming using agroecological principles and the ecosystem services framework. The method was developed from the study of published literature and applications at four study sites chosen for their differences in production intensity: polyculture ponds in France, integrated pig and pond polyculture in Brazil, the culture of striped catfish in Indonesia and a recirculating salmon aquaculture system in France. The study of stakeholders' perceptions of ecosystem services combined with environmental assessment through Life Cycle Assessment and Emergy accounting allowed development of an assessment tool that was used as a basis for co-building evolution scenarios. From this experience, ecological intensifica-tion of aquaculture was defined as the use of ecological processes and functions to increase productivity, strengthen ecosystem services and decrease disservices. It is based on aquaecosystem and biodiversity management and the use of local and traditional knowledge. Expected consequences for farming systems consist of greater autonomy, efficiency and better integration into their surrounding territories. Ecological intensification requires territorial governance and helps improve it from a sustainable development perspective. International audience

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    Horizon / Pleins textes
    Other literature type . 2019
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    Reviews in Aquaculture
    Article . 2017 . Peer-reviewed
    License: Wiley Online Library User Agreement
    Data sources: Crossref
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    Agritrop
    Article . 2019
    Data sources: Agritrop
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    Authors: X. Wen; X. Wen; V. Unger; G. Jurasinski; +15 Authors

    The rewetting of drained peatlands alters peat geochemistry and often leads to sustained elevated methane emission. Although this methane is produced entirely by microbial activity, the distribution and abundance of methane-cycling microbes in rewetted peatlands, especially in fens, is rarely described. In this study, we compare the community composition and abundance of methane-cycling microbes in relation to peat porewater geochemistry in two rewetted fens in northeastern Germany, a coastal brackish fen and a freshwater riparian fen, with known high methane fluxes. We utilized 16S rRNA high-throughput sequencing and quantitative polymerase chain reaction (qPCR) on 16S rRNA, mcrA, and pmoA genes to determine microbial community composition and the abundance of total bacteria, methanogens, and methanotrophs. Electrical conductivity (EC) was more than 3 times higher in the coastal fen than in the riparian fen, averaging 5.3 and 1.5 mS cm−1, respectively. Porewater concentrations of terminal electron acceptors (TEAs) varied within and among the fens. This was also reflected in similarly high intra- and inter-site variations of microbial community composition. Despite these differences in environmental conditions and electron acceptor availability, we found a low abundance of methanotrophs and a high abundance of methanogens, represented in particular by Methanosaetaceae, in both fens. This suggests that rapid (re)establishment of methanogens and slow (re)establishment of methanotrophs contributes to prolonged increased methane emissions following rewetting.

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    DOAJ
    Article . 2018
    Data sources: DOAJ
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    Biogeosciences
    Article
    License: CC BY
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    Biogeosciences
    Article . 2018 . Peer-reviewed
    License: CC BY
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    Biogeosciences (BG)
    Other literature type . 2019
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    Biogeosciences
    Article . 2018
    Data sources: DOAJ-Articles
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    Copernicus Publications
    Other literature type . 2019
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      DOAJ
      Article . 2018
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      Biogeosciences
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      Biogeosciences
      Article . 2018 . Peer-reviewed
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      Biogeosciences (BG)
      Other literature type . 2019
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      Biogeosciences
      Article . 2018
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      Copernicus Publications
      Other literature type . 2019
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    Authors: Lafond, Augustin; Leblanc, Karine; Legras, Justine; Cornet, Veronique; +1 Authors

    In the context of climate change, understanding the ecological processes controlling the functioning and the efficiency of the biological pump is of primary importance. Plankton community structure and species-specific properties are often invoked as likely to affect biogeochemistry and the export of organic and biogenic mate- rial to the ocean interior. Although a major player in this respect, diatoms are still viewed as a single functional type whose diversity is generally overlooked. Here we examine that question, building on the results achieved during the MOBYDICK expedition, which occurred in the vicinity of the Kerguelen Islands (Southern Ocean) in late summer, a time window corresponding to the demise of the annually recurrent phytoplankton blooms already known to be controlled by iron availability. The Si/C/N stoichiometry of the particulate matter was studied in conjunction with the different diatom community structures, their physiological states, as well as their species-specific carbon contents and silicification degrees. Our results show that diatoms outside the iron- fertilized plateau were more heavily silicified, due to the combined effects of both taxonomic composition of the resident community and a direct physiological response to iron stress, resulting in higher Si:C elemental ratios in diatoms as well as in the bulk particulate matter. Despite low silicic acid concentrations, large chains of weakly silicified Corethron inerme were able to grow in the upper mixed layer above the plateau, while in adjacent high nutrient low chlorophyll (HNLC) waters, communities were dominated by Fragilariopsis spp., Cylindrotheca closterium and the centric genera Actinocyclus/Thalassiosira spp. Depth was also an important factor shaping diatom communities, with the presence of a deep and inactive assemblage located within the pycnocline gradient, both on- and off-plateau, which likely resulted from the differential sinking and accumulation of species previously grown at the surface. In HNLC waters, below the mixed layer, detrital frustules of the heavily silicified species Fragilariopsis kerguelensis carried mostly Si, while above the plateau, Eucampia antarctica and Chaetoceros spp. (resting spores and vegetative stages) were efficient vectors of both Si and C to the deeper layers. Our study shows that the stoichiometry of the biological pump cannot be considered solely as a simple response to a single limiting factor (here iron) highlighting the importance of a species-centered approach in order to finely resolve biogeochemical fluxes and improve our understanding of the biological pump. International audience

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    Journal of Marine Systems
    Article . 2020 . Peer-reviewed
    License: Elsevier TDM
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