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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Graeme C. Hays; Luciana C. Ferreira; Ana M. M. Sequeira; Mark G. Meekan; +36 Authors

    It is a golden age for animal movement studies and so an opportune time to assess priorities for future work. We assembled 40 experts to identify key questions in this field, focussing on marine megafauna, which include a broad range of birds, mammals, reptiles, and fish. Research on these taxa has both underpinned many of the recent technical developments and led to fundamental discoveries in the field. We show that the questions have broad applicability to other taxa, including terrestrial animals, flying insects, and swimming invertebrates, and, as such, this exercise provides a useful roadmap for targeted deployments and data syntheses that should advance the field of movement ecology. Workshop funding was granted to M.T., A.M.M.S., and C.M.D. by the UWA Oceans Institute, the Australian Institute of Marine Science, and the Office of Sponsored Research at King Abdullah University of Science and Technology (KAUST). Hays, Graeme C. et al. Peer reviewed

    image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/ Trends in Ecology & ...arrow_drop_down
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    Authors: Dr. Ofri Johan, M.Sc; Bert Hoeksema; Andreas Kunzmann;

    The ‘temperate’ reef coral Coscinaraea marshae Wells, 1962, is reported from Siberut Island (West Sumatra, Indonesia), a near-equatorial locality, 3375 km away from its northernmost range limit in Western Australia, where it is considered a high-latitude endemic. This tropical record suggests that the latitudinal distributions of poorly recorded reef corals may not yet be fully understood, which might be relevant in the light of progressing seawater warming.

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    Article . 2021
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    Article . 2021
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    Authors: William J.F. Le Quesne; Craig Baker-Austin; David W. Verner-Jeffreys; Hanan A. Al-Sarawi; +2 Authors

    It is becoming increasingly clear that the genetic diversity and abundance of antimicrobial resistance (AMR) in non-clinical settings has been underestimated and that the environment plays an integral role in enabling the development of AMR. Due to specific demographic and environmental factors the Gulf Cooperation Council (GCC) region may be particularly susceptible to the threat of AMR, with the marine and aquatic environment potentially playing a specific role in its development and propagation. The demographic factors include rapid population growth, significant international population movements, heavy antibiotic use and insufficient antibiotic stewardship. Environmental factors leading to susceptibility include notable inputs of untreated sewage effluent, high ambient water temperatures, elevated concentrations of heavy metals, and poorly regulated use of antimicrobials in veterinary settings. However, to date there is only a limited understanding of the role that this environment plays in enabling the emergence and propagation AMR in this region. This article provides an overview of the risk associated with AMR in the marine and aquatic environment in the GCC region and proposes a framework for understanding how such environments interact with the wider development and propagation of resistance. It identifies priority actions aligned with the World Health Organisation AMR Global Action Plan and associated national action plans to evaluate the role of marine and aquatic systems relative to the wider factors driving AMR emergence and propagation. The proposed framework and actions to evaluate the role of marine and aquatic environments in driving propagation and emergence of AMR are equally applicable at the regional and national level beyond the GCC. Keywords: AMR, Bacteria, GCC, Emergence, Marine pollution

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    Authors: Álvarez-Blázquez, B. (Blanca);
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    Authors: Martinelli M.; Moroni D.; Salvetti O.;

    We believe that the contribution of volunteers could play a fundamental role in monitoring and protecting the environment. People at sea sighting pollution caused by oil or hydrocarbon spillages can now immediately report this using a freely downloadable mobile application. At the Signals and Images Laboratory (SI-LAB) of the Institute of Information Science and Technology of the National Research Council of Pisa (ISTI-CNR), we have developed a Marine Information System (MIS) for monitoring vessel traffic and oil spills within the Mediterranean basin. The MIS collects and integrates geotagged data related to safety and health issues of the sea from various sources (satellites, optical sensors, electronic noses, autonomous underwater vehicle systems) and provides predictive models to assist the authorities in the management of emergencies at sea. An integrant part of the MIS is represented by the data that can be collected and shared by volunteers who want to collaborate in monitoring the status of the sea. For this purpose, we have developed ARGO Sentinel, a free application for smartphones with a Geolocation System.

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    Authors: Lange, Benjamin A.; Katlein, Christian; Nicolaus, Marcel; Peeken, Ilka; +1 Authors

    Multiscale sea ice algae observations are fundamentally important for projecting changes to sea ice ecosystems, as the physical environment continues to change. In this study, we developed upon previously established methodologies for deriving sea ice-algal chlorophyll a concentrations (chl a) from spectral radiation measurements, and applied these to larger-scale spectral surveys. We conducted four different under-ice spectral measurements: irradiance, radiance, transmittance, and transflectance, and applied three statistical approaches: Empirical Orthogonal Functions (EOF), Normalized Difference Indices (NDI), and multi-NDI. We developed models based on ice core chl a and coincident spectral irradiance/transmittance (N = 49) and radiance/transflectance (N = 50) measurements conducted during two cruises to the central Arctic Ocean in 2011 and 2012. These reference models were ranked based on two criteria: mean robustness R2 and true prediction error estimates. For estimating the biomass of a large-scale data set, the EOF approach performed better than the NDI, due to its ability to account for the high variability of environmental properties experienced over large areas. Based on robustness and true prediction error, the three most reliable models, EOF-transmittance, EOF-transflectance, and NDI-transmittance, were applied to two remotely operated vehicle (ROV) and two Surface and Under-Ice Trawl (SUIT) spectral radiation surveys. In these larger-scale chl a estimates, EOF-transmittance showed the best fit to ice core chl a. Application of our most reliable model, EOF-transmittance, to an 85 m horizontal ROV transect revealed large differences compared to published biomass estimates from the same site with important implications for projections of Arctic-wide ice-algal biomass and primary production.

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    Authors: Anne L. Soerensen; Daniel J. Jacob; David G. Streets; M.L.I. Witt; +4 Authors

    It was recently found that atmospheric Hg had decreased with 20-38% worldwide since the mid 1990s. However, the decrease is not supported by emission inventories that show rising global anthropogenic emissions over the past decades. We analyzed atmospheric data from 22 ship cruises in the North Atlantic (defined as 2°N-65°N), and 15 in the South Atlantic (defined as 70°S-8°N) between 1977 and 2010, as well as surface water Hg 0 from 10 cruises in the West Atlantic Ocean between 1998 and 2010. Linear regression analysis based on these cruise ensembles for each hemisphere will be discussed. We use the GEOS-Chem biogeochemical model to explore possible drivers of the Hg 0 trends found in this study and at previous studies at land based stations. These findings will also be discussed.

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    Article . 2013
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      Article . 2013
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    Authors: de Pauw, L.; Willemsen, G.;
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    Authors: X. Wen; X. Wen; V. Unger; G. Jurasinski; +15 Authors

    Abstract. The rewetting of drained peatlands alters peat geochemistry and often leads to sustained elevated methane emission. Although this methane is produced entirely by microbial activity, the distribution and abundance of methane-cycling microbes in rewetted peatlands, especially in fens, is rarely described. In this study, we compare the community composition and abundance of methane-cycling microbes in relation to peat porewater geochemistry in two rewetted fens in northeastern Germany, a coastal brackish fen and a freshwater riparian fen, with known high methane fluxes. We utilized 16S rRNA high-throughput sequencing and quantitative polymerase chain reaction (qPCR) on 16S rRNA, mcrA, and pmoA genes to determine microbial community composition and the abundance of total bacteria, methanogens, and methanotrophs. Electrical conductivity (EC) was more than 3 times higher in the coastal fen than in the riparian fen, averaging 5.3 and 1.5 mS cm−1, respectively. Porewater concentrations of terminal electron acceptors (TEAs) varied within and among the fens. This was also reflected in similarly high intra- and inter-site variations of microbial community composition. Despite these differences in environmental conditions and electron acceptor availability, we found a low abundance of methanotrophs and a high abundance of methanogens, represented in particular by Methanosaetaceae, in both fens. This suggests that rapid (re)establishment of methanogens and slow (re)establishment of methanotrophs contributes to prolonged increased methane emissions following rewetting.

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    Biogeosciences
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    Article . 2018
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    Biogeosciences
    Article . 2018
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      Biogeosciences
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      Biogeosciences
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  • image/svg+xml art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos Open Access logo, converted into svg, designed by PLoS. This version with transparent background. http://commons.wikimedia.org/wiki/File:Open_Access_logo_PLoS_white.svg art designer at PLoS, modified by Wikipedia users Nina, Beao, JakobVoss, and AnonMoos http://www.plos.org/
    Authors: Matthias Köck; Michael Reggelin; Stefan Immel;

    The NMR-based configurational analysis of complex marine natural products is still not a routine task. Different NMR parameters are used for the assignment of the relative configuration: NOE/ROE, homo- and heteronuclear J couplings as well as anisotropic parameters. The combined distance geometry (DG) and distance bounds driven dynamics (DDD) method allows a model-free approach for the determination of the relative configuration that is invariant to the choice of an initial starting structure and does not rely on comparisons with (DFT) calculated structures. Here, we will discuss the configurational analysis of five complex marine natural products or synthetic derivatives thereof: the cis-palau’amine derivatives 1a and 1b, tetrabromostyloguanidine (1c), plakilactone H (2), and manzamine A (3). The certainty of configurational assignments is evaluated in view of the accuracy of the NOE/ROE data available. These case studies will show the prospective breadth of application of the DG/DDD method.

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    Marine Drugs
    Article . 2021
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    Europe PubMed Central
    Article . 2021
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      Europe PubMed Central
      Article . 2021
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    Authors: Graeme C. Hays; Luciana C. Ferreira; Ana M. M. Sequeira; Mark G. Meekan; +36 Authors

    It is a golden age for animal movement studies and so an opportune time to assess priorities for future work. We assembled 40 experts to identify key questions in this field, focussing on marine megafauna, which include a broad range of birds, mammals, reptiles, and fish. Research on these taxa has both underpinned many of the recent technical developments and led to fundamental discoveries in the field. We show that the questions have broad applicability to other taxa, including terrestrial animals, flying insects, and swimming invertebrates, and, as such, this exercise provides a useful roadmap for targeted deployments and data syntheses that should advance the field of movement ecology. Workshop funding was granted to M.T., A.M.M.S., and C.M.D. by the UWA Oceans Institute, the Australian Institute of Marine Science, and the Office of Sponsored Research at King Abdullah University of Science and Technology (KAUST). Hays, Graeme C. et al. Peer reviewed

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    Authors: Dr. Ofri Johan, M.Sc; Bert Hoeksema; Andreas Kunzmann;

    The ‘temperate’ reef coral Coscinaraea marshae Wells, 1962, is reported from Siberut Island (West Sumatra, Indonesia), a near-equatorial locality, 3375 km away from its northernmost range limit in Western Australia, where it is considered a high-latitude endemic. This tropical record suggests that the latitudinal distributions of poorly recorded reef corals may not yet be fully understood, which might be relevant in the light of progressing seawater warming.

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    Authors: William J.F. Le Quesne; Craig Baker-Austin; David W. Verner-Jeffreys; Hanan A. Al-Sarawi; +2 Authors

    It is becoming increasingly clear that the genetic diversity and abundance of antimicrobial resistance (AMR) in non-clinical settings has been underestimated and that the environment plays an integral role in enabling the development of AMR. Due to specific demographic and environmental factors the Gulf Cooperation Council (GCC) region may be particularly susceptible to the threat of AMR, with the marine and aquatic environment potentially playing a specific role in its development and propagation. The demographic factors include rapid population growth, significant international population movements, heavy antibiotic use and insufficient antibiotic stewardship. Environmental factors leading to susceptibility include notable inputs of untreated sewage effluent, high ambient water temperatures, elevated concentrations of heavy metals, and poorly regulated use of antimicrobials in veterinary settings. However, to date there is only a limited understanding of the role that this environment plays in enabling the emergence and propagation AMR in this region. This article provides an overview of the risk associated with AMR in the marine and aquatic environment in the GCC region and proposes a framework for understanding how such environments interact with the wider development and propagation of resistance. It identifies priority actions aligned with the World Health Organisation AMR Global Action Plan and associated national action plans to evaluate the role of marine and aquatic systems relative to the wider factors driving AMR emergence and propagation. The proposed framework and actions to evaluate the role of marine and aquatic environments in driving propagation and emergence of AMR are equally applicable at the regional and national level beyond the GCC. Keywords: AMR, Bacteria, GCC, Emergence, Marine pollution

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    Authors: Álvarez-Blázquez, B. (Blanca);
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    Authors: Martinelli M.; Moroni D.; Salvetti O.;

    We believe that the contribution of volunteers could play a fundamental role in monitoring and protecting the environment. People at sea sighting pollution caused by oil or hydrocarbon spillages can now immediately report this using a freely downloadable mobile application. At the Signals and Images Laboratory (SI-LAB) of the Institute of Information Science and Technology of the National Research Council of Pisa (ISTI-CNR), we have developed a Marine Information System (MIS) for monitoring vessel traffic and oil spills within the Mediterranean basin. The MIS collects and integrates geotagged data related to safety and health issues of the sea from various sources (satellites, optical sensors, electronic noses, autonomous underwater vehicle systems) and provides predictive models to assist the authorities in the management of emergencies at sea. An integrant part of the MIS is represented by the data that can be collected and shared by volunteers who want to collaborate in monitoring the status of the sea. For this purpose, we have developed ARGO Sentinel, a free application for smartphones with a Geolocation System.

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    CNR ExploRA
    Article . 2013
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    ISTI Open Portal
    Article . 2013
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