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European Marine Science bioRxiv

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European Marine Science bioRxiv

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728 research outcomes, page 1 of 73
  • publication . Preprint . 2017
    Open Access English
    Authors:
    Jakub Rajniak; Ricardo Fabiano Hettwer Giehl; Evelyn Chang; Irene Murgia; Nicolaus von Wirén; Elizabeth S. Sattely;
    Persistent Identifiers
    Publisher: Cold Spring Harbor Laboratory
    Project: NIH | Liberation of Plant Nutri... (1DP2AT008321-01), NIH | GRADUATE TRAINING IN BIOT... (5T32GM008412-02)

    AbstractIron is an essential but often poorly bioavailable nutrient due to its low solubility, especially in alkaline soils. Plants have evolved at least two distinct strategies to extract iron from soil: solubilization of ferric iron by phytosiderophores, and reduction...

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  • publication . Preprint . 2017
    Open Access
    Authors:
    Alon Philosof; Natalya Yutin; José Flores-Uribe; Itai Sharon; Eugene V. Koonin; Oded Béjà;
    Persistent Identifiers
    Publisher: Cold Spring Harbor Laboratory
    Project: TARA | Tara Oceans (2), EC | PHOTOPHAGE (321647), EC | PHOTO.COMM (317184)

    AbstractMarine Group II Euryarchaeota (MGII) are among the most abundant microbes in the oceanic surface waters. So far, however, representatives of MGII have not been cultivated, and no viruses infecting these organisms have been described. Here we present complete gen...

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  • publication . Preprint . 2017
    Open Access
    Authors:
    Enrique González-Tortuero; Rodríguez-Beltran J; Renate Radek; Jesús Blázquez; Alexandro Rodríguez-Rojas;
    Persistent Identifiers
    Publisher: Cold Spring Harbor Laboratory

    AbstractSome natural clays and synthetic nanofibres present in the environment have a severe impact on human health. After several decades of research, the molecular mechanism of how asbestos induce cancers is not well understood. Different fibres, including asbestos, c...

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  • publication . Article . Preprint . Other literature type . 2019
    Open Access
    Authors:
    Edelman, Nathaniel,; Frandsen, Paul,; Miyagi, Michael; Clavijo, Bernardo; Davey, John; Dikow, Rebecca,; García-Accinelli, Gonzalo; Van Belleghem, Steven,; Patterson, Nick; Neafsey, Daniel,; ...
    Publisher: bioRxiv
    Countries: France, United Kingdom, Colombia, United Kingdom
    Project: NIH | Large Scale Sequencing an... (3U54HG003067-07S1), NSF | RII Track-2 FEC: Genomic ... (1736026), NIH | Whole-genome shotgun sequ... (2R01HG003474-06A1), UKRI | BBR GenomeHubs - agile ge... (BB/R015325/1), NIH | Project 1: Modeling tumor... (1U54CA193313-01), EC | FITINV (655857), NSERC , UKRI | Building a genome analyti... (BB/K020161/1), NIH | Characterizing the Molecu... (5R01GM108626-03), ANR | HybEvol (ANR-12-JSV7-0005),...

    We here pioneer a low-cost assembly strategy for 20 Heliconiini genomes to characterize the evolutionary history of the rapidly radiating genus Heliconius. A bifurcating tree provides a poor fit to the data, and we therefore explore a reticulate phylogeny for Heliconius...

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  • publication . Preprint . 2018
    Open Access English
    Authors:
    Anaïs Portet; Eve Toulza; Ana Lokmer; Camille Huot; David Duval; Richard Galinier; Benjamin Gourbal;
    Persistent Identifiers
    Publisher: HAL CCSD
    Country: France

    SummaryHost-associated microbiota cari affect the fitness of its host i η a number of ways, including the modification of host-parasite interactions and thus the outcome of disease.Biomphalaria glabratais the vector snail of the trematodeSchistosoma mansoni,the agent of...

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  • publication . Article . Preprint . 2016
    Open Access
    Authors:
    Yue O. O. Hu; Bengt Karlson; Sophie Charvet; Anders F. Andersson;
    Publisher: Cold Spring Harbor Laboratory
    Project: EC | JERICO-NEXT (654410), EC | JERICO (262584)

    Microscopic plankton form the productive base of both marine and freshwater ecosystems and are key drivers of global biogeochemical cycles of carbon and nutrients. Plankton diversity is immense with representations from all major phyla within the three domains of life. ...

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  • publication . Article . Preprint . 2018
    Open Access English
    Authors:
    Lucas Czech; Alexandros Stamatakis;
    Publisher: Public Library of Science (PLoS)
    Country: Germany
    Project: TARA | Tara Oceans (2)

    1AbstractThe exponential decrease in molecular sequencing cost generates unprecedented amounts of data. Hence, scalable methods to analyze these data are required. Phylogenetic (or Evolutionary) Placement methods identify the evolutionary provenance of anonymous sequenc...

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  • publication . Preprint . 2020
    Open Access
    Authors:
    Kenneth Dumack; Kai Feng; Sebastian Flues; Melanie Sapp; Susanne Schreiter; Rita Grosch; Laura E. Rose; Ye Deng; Kornelia Smalla; Michael Bonkowski;
    Persistent Identifiers
    Publisher: Cold Spring Harbor Laboratory

    AbstractIn a field experiment we investigated the influence of the environmental filters soil type and plant species identity on rhizosphere community assembly of Cercozoa, a dominant group of (mostly bacterivorous) soil protists. The experiment was set up with two plan...

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  • publication . Article . Preprint . 2019
    Open Access
    Authors:
    Braga, Daniel; Last, Daniel; Hasan, Mahmudul; Guo, Huijuan; Leichnitz, Daniel; Uzum, Zerrin; Richter, Ingrid; Schalk, Felix; Beemelmanns, Christine; Hertweck, Christian; ...
    Publisher: American Chemical Society (ACS)
    Project: EC | FUNBIOSIS (794343)

    AbstractCoenzyme F420is a specialized redox cofactor with a highly negative redox potential. It supports biochemical processes like methanogenesis, degradation of xenobiotics or the biosynthesis of antibiotics. Although well-studied in methanogenic archaea and actinobac...

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  • publication . Preprint . 2018
    Open Access
    Authors:
    Teh, Ooi-Kock; Lee, Chil-Woo; Ditengou, Franck Anicet; Klecker, Till; Furlan, Giulia; Zietz, Marco; Hause, Gerd; Eschen-Lippol, Lennart; Hoehenwarter, Wolfgang; Lee, Justin; ...
    Persistent Identifiers
    Publisher: bioRxiv

    AbstractThe exocyst is a conserved hetero-octameric complex that mediates early tethering of post-Golgi vesicles during exocytosis. Its Exo70 subunit functions as a spatiotemporal regulator by mediating numerous interactions with proteins and lipids. However, a molecula...

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728 research outcomes, page 1 of 73